Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156877 SustainPine v3.0 312
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Saccharomycetales RepID=Q6BRN2_DEBHA 1.0e-27
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.267e-14
Complete
sp_v3.0_unigene156942 SustainPine v3.0 442
• AutoFact: Ribosomal protein S7 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C500_9EUKA 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.647e-26
C-terminus
sp_v3.0_unigene156948 SustainPine v3.0 243
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.506e-14
Internal
sp_v3.0_unigene156956 SustainPine v3.0 394
• AutoFact: 40s ribosomal protein S15, putative n=1 Tax=Paramecium tetraurelia RepID=Q6BFE0_PARTE 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 2.026e-10
Putative N-terminus
sp_v3.0_unigene157003 SustainPine v3.0 225
• AutoFact: Putative 40S ribosomal protein RPS3 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDN1_9BILA 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
Internal
sp_v3.0_unigene157021 SustainPine v3.0 515
• AutoFact: 40S ribosomal protein S19-1 n=8 Tax=Arabidopsis RepID=RS191_ARATH 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S19 1.268e-13
Putative Complete
sp_v3.0_unigene157041 SustainPine v3.0 303
• AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 6.83e-21
Internal
sp_v3.0_unigene157053 SustainPine v3.0 405
• AutoFact: 40S ribosomal protein S24 n=5 Tax=Physcomitrella patens subsp. patens RepID=A9U2W2_PHYPA 1.0e-37
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene157057 SustainPine v3.0 368
• AutoFact: 40S ribosomal protein S12 n=11 Tax=sordariomyceta RepID=A4R8G8_MAGO7 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene157079 SustainPine v3.0 211
• AutoFact: 40S ribosomal protein SA n=1 Tax=Nematostella vectensis RepID=RSSA_NEMVE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.11e-36
Internal
sp_v3.0_unigene157098 SustainPine v3.0 353
• AutoFact: Putative ribosomal protein SA (Fragment) n=1 Tax=Barentsia elongata RepID=A8WCG5_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.32e-36
Internal
sp_v3.0_unigene157106 SustainPine v3.0 344
• AutoFact: PREDICTED: similar to yeast ribosomal protein S28 homologue n=1 Tax=Monodelphis domestica RepID=UPI0000F2C5F5 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative C-terminus
sp_v3.0_unigene157147 SustainPine v3.0 382
• AutoFact: Ribosomal protein S7-like protein n=1 Tax=Adineta ricciae RepID=Q56J84_ADIRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157215 SustainPine v3.0 273
• AutoFact: Ribosomal protein S2 n=9 Tax=Euteleostomi RepID=Q6NWC3_DANRE 1.0e-32
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.066e-19
Internal
sp_v3.0_unigene157284 SustainPine v3.0 337
• AutoFact: Ribosomal protein S27 n=1 Tax=Ectocarpus siliculosus RepID=D7FUE0_ECTSI 2.0e-35
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 2.073e-26
Complete
sp_v3.0_unigene157305 SustainPine v3.0 171
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 5.057e-37
N-terminus
sp_v3.0_unigene157333 SustainPine v3.0 316
• AutoFact: 40S ribosomal protein S3a putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W988_9STRA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157338 SustainPine v3.0 328
• AutoFact: [J] COG0052 Ribosomal protein S2 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene157365 SustainPine v3.0 307
• AutoFact: PREDICTED: 40S ribosomal protein S27-like n=1 Tax=Macaca mulatta RepID=UPI0000D9D5EE 1.0e-31
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 2.073e-26
Complete
sp_v3.0_unigene157387 SustainPine v3.0 296
• AutoFact: Ribosomal protein S7 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C500_9EUKA 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 3.591e-26
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain