Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150415 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Euteleostei RepID=C0H7L0_SALSA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
C-terminus
sp_v3.0_unigene150421 SustainPine v3.0 259
• AutoFact: Ribosomal protein S20 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D50_OSTTA 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.148e-14
C-terminus
sp_v3.0_unigene150427 SustainPine v3.0 287
• AutoFact: 40S ribosomal protein S24 n=11 Tax=Poaceae RepID=C5XIE4_SORBI 8.0e-19
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
C-terminus
sp_v3.0_unigene150439 SustainPine v3.0 366
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150461 SustainPine v3.0 239
• AutoFact: Ribosomal protein S15 isoform n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGY1_9EUKA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S8, putative 2.138e-08
Internal
sp_v3.0_unigene150474 SustainPine v3.0 254
• AutoFact: Ribosomal protein 3 small subunit (Fragment) n=1 Tax=Suberites fuscus RepID=Q2N156_9METZ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 2.695e-07
Internal
sp_v3.0_unigene150475 SustainPine v3.0 362
• AutoFact: Ribosomal protein s4a n=1 Tax=Ancylostoma caninum RepID=A4ZVZ6_ANCCA 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.916e-20
C-terminus
sp_v3.0_unigene150508 SustainPine v3.0 393
• AutoFact: 40S ribosomal protein S25 n=1 Tax=Branchiostoma belcheri RepID=RS25_BRABE 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 4.456e-16
Complete
sp_v3.0_unigene150545 SustainPine v3.0 149
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAH6_PHYPA 2.0e-14
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 1.71239e-42
Putative C-terminus
sp_v3.0_unigene150601 SustainPine v3.0 470
• AutoFact: 40S ribosomal protein S11, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AK39_CRYMR 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.581e-28
Putative Complete
sp_v3.0_unigene150610 SustainPine v3.0 260
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
Putative C-terminus
sp_v3.0_unigene150617 SustainPine v3.0 371
• AutoFact: 40S ribosomal protein S13 n=1 Tax=Trichinella spiralis RepID=E5S1B4_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.325e-14
C-terminus
sp_v3.0_unigene150624 SustainPine v3.0 449
• AutoFact: 40S ribosomal protein S7 [Ictalurus punctatus] sp|Q90YR7.1|RS7_ICTPU RecName: Full=40S ribosomal protein S7 gb|AAK95189.1|AF402815_1 40S ribosomal protein S7 [Ictalurus punctatus] gb|ADO29326.1| 40S ribosomal protein s7 [Ictalurus punctatus] 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 3.387e-26
C-terminus
sp_v3.0_unigene150651 SustainPine v3.0 343
• AutoFact: Putative ribosomal protein S20 n=1 Tax=Barentsia elongata RepID=A8UAG4_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene150654 SustainPine v3.0 437
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.691e-10
Putative Complete
sp_v3.0_unigene150671 SustainPine v3.0 410
• AutoFact: ribosomal protein S18 [Cherax destructor] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150691 SustainPine v3.0 327
• AutoFact: PREDICTED: 40S ribosomal protein S27-like n=1 Tax=Monodelphis domestica RepID=UPI0000F2BDB3 3.0e-35
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 2.073e-26
Complete
sp_v3.0_unigene150720 SustainPine v3.0 242
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 9.47e-32
Putative C-terminus
sp_v3.0_unigene150730 SustainPine v3.0 403
• AutoFact: 40S ribosomal protein S7 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NP68_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.915e-26
Internal
sp_v3.0_unigene150762 SustainPine v3.0 444
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Branchiostoma floridae RepID=C3Z5D0_BRAFL 3.99931e-42
• FL-Next: sp=40S ribosomal protein S24-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain