Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145718 SustainPine v3.0 716
• AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.5e-24
Misassembled
sp_v3.0_unigene145783 SustainPine v3.0 590
• AutoFact: ribosomal protein S26 [Pisum sativum] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Granule-bound starch synthase 1, chloroplastic/amyloplastic 3.126e-28
N-terminus
sp_v3.0_unigene145852 SustainPine v3.0 613
• AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 4.672e-17
Complete
sp_v3.0_unigene145911 SustainPine v3.0 569
• AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 gb|ABA41527.1| cyc07 [Nicotiana tabacum] 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 9.573e-25
C-terminus
sp_v3.0_unigene145958 SustainPine v3.0 490
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 9.0e-28
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 6.271e-09
Complete
sp_v3.0_unigene145997 SustainPine v3.0 466
• AutoFact: ribosomal protein S26 [Pisum sativum] 9.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S26 8.797e-19
Putative Complete
sp_v3.0_unigene147649 SustainPine v3.0 1136
• AutoFact: UDP-glucose 6-dehydrogenase n=30 Tax=Magnoliophyta RepID=UGDH_SOYBN 0.0
• FL-Next: sp=UDP-glucose 6-dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucose dehydrogenase 2.458e-31
C-terminus
sp_v3.0_unigene147691 SustainPine v3.0 235
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28e 1.246e-08
Putative Complete
sp_v3.0_unigene148081 SustainPine v3.0 432
• AutoFact: 40S ribosomal protein S16 n=1 Tax=Lupinus polyphyllus RepID=RS16_LUPPO 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.015e-32
C-terminus
sp_v3.0_unigene148755 SustainPine v3.0 269
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.55e-07
Putative N-terminus
sp_v3.0_unigene149030 SustainPine v3.0 184
• AutoFact: 40S ribosomal protein S29 n=1 Tax=Dictyostelium purpureum RepID=F1A460_DICPU 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S29 6.589e-12
Putative Complete
sp_v3.0_unigene149267 SustainPine v3.0 136
• AutoFact: PREDICTED: 40S ribosomal protein S17-like n=1 Tax=Anolis carolinensis RepID=UPI000203AAC3 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene149303 SustainPine v3.0 240
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Cyanophora paradoxa RepID=Q9SCG1_CYAPA 1.0e-15
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 2.509e-40
N-terminus
sp_v3.0_unigene149688 SustainPine v3.0 268
• AutoFact: 40S ribosomal protein S14 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LU90_ARALL 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 1.651e-24
C-terminus
sp_v3.0_unigene149714 SustainPine v3.0 337
• AutoFact: Probable RPS17B-ribosomal protein S17.e.B n=1 Tax=Sporisorium reilianum RepID=E6ZSQ2_9BASI 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S17-4 3.816e-12
C-terminus
sp_v3.0_unigene149740 SustainPine v3.0 207
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.709e-19
Internal
sp_v3.0_unigene149747 SustainPine v3.0 344
• AutoFact: 40S ribosomal protein S5 n=2 Tax=Pucciniales RepID=E3K755_PUCGT 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 6.618e-22
C-terminus
sp_v3.0_unigene150090 SustainPine v3.0 277
• AutoFact: 40S ribosomal protein S25-3 [Arabidopsis thaliana] sp|Q8GYL5.2|RS253_ARATH RecName: Full=40S ribosomal protein S25-3 gb|AAM66949.1| ribosomal protein S25 [Arabidopsis thaliana] dbj|BAD43843.1| 40S ribosomal 25S subunit [Arabidopsis thaliana] gb|ABF59002.1 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 8.252e-21
C-terminus
sp_v3.0_unigene150095 SustainPine v3.0 420
• AutoFact: 40S ribosomal protein S33 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WB00_9STRA 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 7.117e-11
Putative C-terminus
sp_v3.0_unigene150160 SustainPine v3.0 492
• AutoFact: 40S ribosomal protein S11 (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDL5_BRAPC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.401e-28
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain