Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gag-Pol polyprotein

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77665 SustainPine v3.0 360
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.979e-15
Putative Complete
sp_v3.0_unigene95359 SustainPine v3.0 1128
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.167e-10
C-terminus
sp_v3.0_unigene95966 SustainPine v3.0 412
AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 6.742e-08
Internal
sp_v3.0_unigene99014 SustainPine v3.0 624
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.138e-12
Complete
sp_v3.0_unigene106753 SustainPine v3.0 478
AutoFact: rve domain containing protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.308e-06
Internal
sp_v3.0_unigene108697 SustainPine v3.0 548
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.043e-12
Putative Complete
sp_v3.0_unigene109303 SustainPine v3.0 419
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-27
FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Sma3: Gag-Pol polyprotein 1.513e-14
Internal
sp_v3.0_unigene110031 SustainPine v3.0 439
AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 3.0e-25
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Gag-Pol polyprotein 3.741e-10
Internal
sp_v3.0_unigene120855 SustainPine v3.0 383
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 7.315e-09
Internal
sp_v3.0_unigene123749 SustainPine v3.0 262
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 4.0e-19
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 1.097e-09
Internal
sp_v3.0_unigene131916 SustainPine v3.0 386
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-24
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Gag-Pol polyprotein 6.056e-09
C-terminus
sp_v3.0_unigene139780 SustainPine v3.0 436
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Sma3: Gag-Pol polyprotein 4.218e-14
Internal
sp_v3.0_unigene141611 SustainPine v3.0 246
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 5.034e-07
Internal
sp_v3.0_unigene144637 SustainPine v3.0 395
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 8.165e-07
Internal
sp_v3.0_unigene144919 SustainPine v3.0 406
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-40
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 4.493e-09
Internal
sp_v3.0_unigene148901 SustainPine v3.0 276
AutoFact: RVT_2 domain containing protein 7.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 4.001e-07
Internal
sp_v3.0_unigene150257 SustainPine v3.0 410
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 9.834e-08
Internal
sp_v3.0_unigene159749 SustainPine v3.0 364
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.292e-12
C-terminus
sp_v3.0_unigene159788 SustainPine v3.0 484
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Gag-Pol polyprotein 1.254e-10
Internal
sp_v3.0_unigene159815 SustainPine v3.0 371
AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.073e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain