Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gag-Pol polyprotein

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64213 SustainPine v3.0 260
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUM9_ORYSJ 2.0e-18
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 1.374e-09
Putative N-terminus
sp_v3.0_unigene64389 SustainPine v3.0 228
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 6.391e-11
Putative C-terminus
sp_v3.0_unigene64468 SustainPine v3.0 196
AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 7.0e-16
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 8.846e-14
Putative C-terminus
sp_v3.0_unigene64777 SustainPine v3.0 150
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUM9_ORYSJ 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 7.13e-10
Internal
sp_v3.0_unigene65253 SustainPine v3.0 93
AutoFact: Putative polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SYE8_ARATH 1.0e-07
FL-Next: tr=Putative polyprotein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Gag-Pol polyprotein 2.462e-14
Internal
sp_v3.0_unigene65330 SustainPine v3.0 295
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 4.0e-26
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Gag-Pol polyprotein 8.634e-13
Internal
sp_v3.0_unigene66277 SustainPine v3.0 390
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 1.775e-12
Internal
sp_v3.0_unigene66598 SustainPine v3.0 380
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-38
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 4.565e-07
Internal
sp_v3.0_unigene66721 SustainPine v3.0 300
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53JS9_ORYSJ 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 9.202e-10
Putative N-terminus
sp_v3.0_unigene67276 SustainPine v3.0 218
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 6.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 2.544e-08
Internal
sp_v3.0_unigene68802 SustainPine v3.0 303
AutoFact: Pol polyprotein n=1 Tax=Citrus x paradisi RepID=Q94FM1_CITPA 9.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 8.407e-09
C-terminus
sp_v3.0_unigene69477 SustainPine v3.0 218
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 5.658e-13
C-terminus
sp_v3.0_unigene70035 SustainPine v3.0 326
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 4.383e-10
Internal
sp_v3.0_unigene70249 SustainPine v3.0 459
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 2.609e-07
Putative C-terminus
sp_v3.0_unigene70700 SustainPine v3.0 371
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUF6_ORYSJ 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 3.92e-11
Complete
sp_v3.0_unigene70937 SustainPine v3.0 407
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 1.0e-22
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 2.724e-12
C-terminus
sp_v3.0_unigene71303 SustainPine v3.0 382
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 5.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 7.851e-09
Internal
sp_v3.0_unigene72148 SustainPine v3.0 274
AutoFact: Putative Ty3-gypsy-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQ11_ARATH 7.0e-23
FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Gag-Pol polyprotein 9.502e-10
Putative C-terminus
sp_v3.0_unigene74308 SustainPine v3.0 248
AutoFact: rve domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 6.235e-07
Internal
sp_v3.0_unigene76201 SustainPine v3.0 439
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.855e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain