Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gag-Pol polyprotein

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56267 SustainPine v3.0 340
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.204e-11
C-terminus
sp_v3.0_unigene56377 SustainPine v3.0 386
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 6.0e-38
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Gag-Pol polyprotein 3.525e-11
Internal
sp_v3.0_unigene56904 SustainPine v3.0 338
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.004e-07
Internal
sp_v3.0_unigene57528 SustainPine v3.0 418
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 3.006e-08
Putative C-terminus
sp_v3.0_unigene57543 SustainPine v3.0 380
AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 3.223e-08
Internal
sp_v3.0_unigene57575 SustainPine v3.0 371
AutoFact: rve domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 1.54e-12
Internal
sp_v3.0_unigene57652 SustainPine v3.0 381
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.711e-11
Complete
sp_v3.0_unigene57829 SustainPine v3.0 287
AutoFact: GK15001 gene product from transcript GK15001-RA 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.062e-07
Internal
sp_v3.0_unigene58526 SustainPine v3.0 490
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.805e-14
Putative Complete
sp_v3.0_unigene58684 SustainPine v3.0 346
AutoFact: rve domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 7.867e-14
Putative Complete
sp_v3.0_unigene58730 SustainPine v3.0 327
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.328e-07
Internal
sp_v3.0_unigene58831 SustainPine v3.0 245
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 5.812e-15
C-terminus
sp_v3.0_unigene59304 SustainPine v3.0 184
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 3.0e-12
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 8.992e-07
Internal
sp_v3.0_unigene59890 SustainPine v3.0 296
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Asparagus officinalis RepID=Q2A9Z5_ASPOF 8.0e-25
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 7.238e-11
Putative N-terminus
sp_v3.0_unigene60065 SustainPine v3.0 267
AutoFact: rve domain containing protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 1.305e-09
Putative C-terminus
sp_v3.0_unigene62205 SustainPine v3.0 230
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.201e-07
Internal
sp_v3.0_unigene62231 SustainPine v3.0 200
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 1.0e-13
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 1.347e-13
Internal
sp_v3.0_unigene62678 SustainPine v3.0 180
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 9.556e-07
Internal
sp_v3.0_unigene63659 SustainPine v3.0 237
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.411e-09
Putative Complete
sp_v3.0_unigene64059 SustainPine v3.0 142
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 2.041e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain