Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67986 SustainPine v3.0 351
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene68379 SustainPine v3.0 322
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative Complete
sp_v3.0_unigene69100 SustainPine v3.0 227
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.358e-14
Internal
sp_v3.0_unigene69643 SustainPine v3.0 256
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06286_PINCU 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Reverse transcriptase 9.498e-06
Internal
sp_v3.0_unigene69666 SustainPine v3.0 268
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.12e-12
Putative C-terminus
sp_v3.0_unigene69942 SustainPine v3.0 448
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 2.468e-07
Internal
sp_v3.0_unigene70015 SustainPine v3.0 396
• AutoFact: Gag-pol polyprotein n=1 Tax=Solanum lycopersicum RepID=E6Y5Q2_SOLLC 5.0e-37
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 4.547e-27
Putative Complete
sp_v3.0_unigene70075 SustainPine v3.0 449
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 5.0e-25
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 6.678e-18
Internal
sp_v3.0_unigene70175 SustainPine v3.0 440
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 3.0e-38
• FL-Next: tr=RNA-directed DNA polymerase; Arachis hypogaea (Peanut). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene70189 SustainPine v3.0 438
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene70659 SustainPine v3.0 353
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-25
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 3.172e-10
Putative C-terminus
sp_v3.0_unigene70737 SustainPine v3.0 381
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-34
• FL-Next: tr=Putative uncharacterized protein Sb04g023880; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene70745 SustainPine v3.0 361
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-34
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene71237 SustainPine v3.0 414
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 3.571e-14
Internal
sp_v3.0_unigene71416 SustainPine v3.0 342
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene71560 SustainPine v3.0 278
• AutoFact: RVT_1 domain containing protein 5.0e-09
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.4e-06
Putative C-terminus
sp_v3.0_unigene71561 SustainPine v3.0 352
• AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 6.0e-18
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 8.793e-07
Internal
sp_v3.0_unigene71761 SustainPine v3.0 113
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus thunbergii RepID=Q9ZRK1_PINTH 5.0e-09
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 7.173e-08
Internal
sp_v3.0_unigene71823 SustainPine v3.0 267
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.415e-19
Internal
sp_v3.0_unigene71848 SustainPine v3.0 328
• AutoFact: H0112G12.6 protein n=2 Tax=Oryza sativa RepID=Q01JL4_ORYSA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.566e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain