Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65112 SustainPine v3.0 153
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Ginkgo biloba RepID=Q9FY21_GINBI 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 3.198e-13
Internal
sp_v3.0_unigene65167 SustainPine v3.0 307
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 2.085e-10
Internal
sp_v3.0_unigene65420 SustainPine v3.0 178
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 6.827e-15
Internal
sp_v3.0_unigene66003 SustainPine v3.0 435
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 5.191e-15
Internal
sp_v3.0_unigene66149 SustainPine v3.0 303
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 7.0e-19
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.917e-13
Putative C-terminus
sp_v3.0_unigene66332 SustainPine v3.0 402
• AutoFact: OSJNBa0004L19.22 protein n=1 Tax=Oryza sativa RepID=Q5JPZ2_ORYSA 9.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.755e-15
C-terminus
sp_v3.0_unigene66386 SustainPine v3.0 374
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06286_PINCU 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.944e-21
Internal
sp_v3.0_unigene66457 SustainPine v3.0 364
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-25
• FL-Next: tr=Putative uncharacterized protein Sb03g001780; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene66511 SustainPine v3.0 263
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Orobanche cernua var. cumana RepID=Q27U10_OROCE 1.0e-22
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene66581 SustainPine v3.0 377
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Brassica oleracea (Wild cabbage). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Putative C-terminus
sp_v3.0_unigene66594 SustainPine v3.0 392
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 6.0e-25
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 4.724e-15
Internal
sp_v3.0_unigene66608 SustainPine v3.0 425
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-33
• FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
• Sma3: Reverse transcriptase 3.148e-12
Internal
sp_v3.0_unigene66712 SustainPine v3.0 351
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 2.085e-10
Internal
sp_v3.0_unigene66939 SustainPine v3.0 151
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene67149 SustainPine v3.0 216
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus thunbergii RepID=Q9ZRK1_PINTH 7.0e-12
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 1.783e-29
Internal
sp_v3.0_unigene67229 SustainPine v3.0 293
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-27
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.22e-09
Putative N-terminus
sp_v3.0_unigene67452 SustainPine v3.0 378
• AutoFact: Reverse transcriptase (Fragment) n=7 Tax=Prunus mume RepID=C8C9R0_PRUMU 6.0e-38
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene67660 SustainPine v3.0 133
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Reverse transcriptase 9.498e-06
Internal
sp_v3.0_unigene67780 SustainPine v3.0 343
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.253e-14
Internal
sp_v3.0_unigene67804 SustainPine v3.0 175
• AutoFact: Gag-pol polyprotein n=1 Tax=Solanum lycopersicum RepID=E6Y5Q2_SOLLC 5.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain