Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54583 SustainPine v3.0 205
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 3.0e-21
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene54936 SustainPine v3.0 297
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 5.83e-29
Internal
sp_v3.0_unigene54943 SustainPine v3.0 210
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-10
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 9.498e-06
Internal
sp_v3.0_unigene55240 SustainPine v3.0 274
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 3.131e-19
Internal
sp_v3.0_unigene55258 SustainPine v3.0 261
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.259e-28
Internal
sp_v3.0_unigene55344 SustainPine v3.0 167
• AutoFact: Unassigned protein
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.146e-32
Putative N-terminus
sp_v3.0_unigene55349 SustainPine v3.0 392
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE 2.0e-18
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 7.524e-08
Internal
sp_v3.0_unigene55721 SustainPine v3.0 274
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.329e-20
Internal
sp_v3.0_unigene55869 SustainPine v3.0 296
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.349e-16
Internal
sp_v3.0_unigene55878 SustainPine v3.0 287
• AutoFact: Os08g0164800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7S9_ORYSJ 3.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 8.213e-10
Putative C-terminus
sp_v3.0_unigene55929 SustainPine v3.0 102
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 4.0e-09
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene56284 SustainPine v3.0 479
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene56408 SustainPine v3.0 356
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.067e-17
Internal
sp_v3.0_unigene56475 SustainPine v3.0 363
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.75e-12
Internal
sp_v3.0_unigene56751 SustainPine v3.0 409
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9FY23_GINBI 8.0e-11
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Reverse transcriptase 5.191e-15
Internal
sp_v3.0_unigene56826 SustainPine v3.0 498
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.865e-06
Internal
sp_v3.0_unigene57009 SustainPine v3.0 244
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.339e-08
Internal
sp_v3.0_unigene57027 SustainPine v3.0 300
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 6.754e-19
Internal
sp_v3.0_unigene57144 SustainPine v3.0 308
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 4.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 4.608e-11
Internal
sp_v3.0_unigene57178 SustainPine v3.0 138
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.058e-23
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain