Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene149224 SustainPine v3.0 227
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 6.0e-27
• FL-Next: tr=Putative uncharacterized protein Sb04g023880; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Reverse transcriptase 1.114e-08
Internal
sp_v3.0_unigene149442 SustainPine v3.0 273
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 4.0e-24
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene149707 SustainPine v3.0 310
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.015e-25
Internal
sp_v3.0_unigene159035 SustainPine v3.0 349
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Orobanche cernua var. cumana RepID=Q27U10_OROCE 8.0e-38
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
N-terminus
sp_v3.0_unigene159520 SustainPine v3.0 476
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 9.498e-06
N-terminus
sp_v3.0_unigene159529 SustainPine v3.0 466
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 9.0e-20
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 9.498e-06
Internal
sp_v3.0_unigene159586 SustainPine v3.0 293
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.169e-19
Internal
sp_v3.0_unigene159844 SustainPine v3.0 427
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 4.0e-32
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.84464e-43
N-terminus
sp_v3.0_unigene159899 SustainPine v3.0 346
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-20
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Reverse transcriptase 5.883e-31
Internal
sp_v3.0_unigene160018 SustainPine v3.0 388
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 4.0e-37
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene160143 SustainPine v3.0 177
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.033e-21
Internal
sp_v3.0_unigene160296 SustainPine v3.0 443
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 4.0e-35
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene160635 SustainPine v3.0 379
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06286_PINCU 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene160638 SustainPine v3.0 261
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-11
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Reverse transcriptase 4.339e-08
Internal
sp_v3.0_unigene160689 SustainPine v3.0 279
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 2.602e-24
Internal
sp_v3.0_unigene160770 SustainPine v3.0 329
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.332e-11
Internal
sp_v3.0_unigene160858 SustainPine v3.0 292
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 7.0e-27
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 3.903e-14
Putative C-terminus
sp_v3.0_unigene160927 SustainPine v3.0 385
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 1.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.21e-23
C-terminus
sp_v3.0_unigene160937 SustainPine v3.0 347
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 9.498e-06
Internal
sp_v3.0_unigene161275 SustainPine v3.0 425
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain