Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribonuclease III activity

Term: GO:0004525  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2820 SustainPine v3.0 2679
• AutoFact: calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] sp|Q0WVZ1.1|Y3330_ARATH RecName: Full=Putative metallophosphoesterase At3g03305; Flags: Precursor dbj|BAE98707.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73927.1| calci 0.0
• FL-Next: sp=Putative metallophosphoesterase At3g03305; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene3828 SustainPine v3.0 2917
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 1.06e-11
Putative Complete
sp_v3.0_unigene6092 SustainPine v3.0 1290
• AutoFact: Ribonuclease III-like protein [Arabidopsis thaliana] gb|AAQ62445.1| At1g55140 [Arabidopsis thaliana] dbj|BAD42926.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33190.1| Ribonuclease III-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6890 SustainPine v3.0 1026
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 7.19e-13
Putative Complete
sp_v3.0_unigene9305 SustainPine v3.0 218
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HYI3_POPTR 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 2.962e-07
Internal
sp_v3.0_unigene9777 SustainPine v3.0 721
• AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.117e-08
Internal
sp_v3.0_unigene13761 SustainPine v3.0 1216
• AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 1.025e-12
Complete
sp_v3.0_unigene15571 SustainPine v3.0 266
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 2.517e-07
N-terminus
sp_v3.0_unigene20457 SustainPine v3.0 2220
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene29117 SustainPine v3.0 2712
• AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative PRLI-interacting factor K 7.886e-13
Complete
sp_v3.0_unigene34076 SustainPine v3.0 2112
• AutoFact: CAF protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 3.451e-16
C-terminus
sp_v3.0_unigene34087 SustainPine v3.0 1557
• AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similarity to ribonuclease III 4.873e-06
Complete
sp_v3.0_unigene35270 SustainPine v3.0 518
• AutoFact: Unassigned protein 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene40115 SustainPine v3.0 150
• AutoFact: FAP multi-domain protein 1.0e-16
• Sma3: Glycine-rich protein 3.191e-13
unknown
sp_v3.0_unigene41822 SustainPine v3.0 148
• AutoFact: Endoribonuclease Dicer homolog 3a n=1 Tax=Oryza sativa Japonica Group RepID=DCL3A_ORYSJ 4.0e-13
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative Endoribonuclease Dicer homolog 9.26e-06
Internal
sp_v3.0_unigene47331 SustainPine v3.0 332
• AutoFact: dicer-like protein [Oryza sativa Indica Group] 1.0e-17
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene47957 SustainPine v3.0 1461
• AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene50584 SustainPine v3.0 308
• AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 8.0e-19
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene50893 SustainPine v3.0 181
• AutoFact: dicer-like protein [Oryza sativa Indica Group] 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 4.387e-16
Internal
sp_v3.0_unigene53768 SustainPine v3.0 500
• AutoFact: Dicer-like 1b protein [Physcomitrella patens] 1.0e-22
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain