Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: 4-coumarate:CoA ligase

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2729 SustainPine v3.0 2104
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene15868 SustainPine v3.0 1989
• AutoFact: 4-coumarate--CoA ligase-like 1 [Arabidopsis thaliana] sp|Q9LQ12.1|4CLL1_ARATH RecName: Full=4-coumarate--CoA ligase-like 1; AltName: Full=4-coumarate--CoA ligase isoform 10; Short=At4CL10 gb|AAF75805.1|AC011000_8 Strong similarity to 4-coumarate:CoA ligas 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 9.758e-22
Complete
sp_v3.0_unigene25251 SustainPine v3.0 1723
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 1.429e-35
C-terminus
sp_v3.0_unigene31154 SustainPine v3.0 2477
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene51455 SustainPine v3.0 646
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-23
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: 4-coumarate:CoA ligase 1.523e-06
Internal
sp_v3.0_unigene64393 SustainPine v3.0 152
• AutoFact: 4-coumarate:coenzyme A ligase 3 n=4 Tax=Funariaceae RepID=B7SBA1_PHYPA 3.0e-12
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 7.28675e-44
Internal
sp_v3.0_unigene127584 SustainPine v3.0 942
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene132918 SustainPine v3.0 518
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-23
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 1.007e-34
Internal
sp_v3.0_unigene135683 SustainPine v3.0 451
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-19
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
C-terminus
sp_v3.0_unigene142464 SustainPine v3.0 1091
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
N-terminus
sp_v3.0_unigene143611 SustainPine v3.0 472
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Internal
sp_v3.0_unigene195562 SustainPine v3.0 327
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate:CoA ligase 1.429e-35
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain