Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: seed coat development

Term: GO:0010214  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2549 SustainPine v3.0 1984
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene4118 SustainPine v3.0 1238
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.433e-09
C-terminus
sp_v3.0_unigene8951 SustainPine v3.0 2690
AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gb|AAK68773.1| Similar to dTDP-D-glu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHM1 2.951e-08
Complete
sp_v3.0_unigene22932 SustainPine v3.0 1851
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene34175 SustainPine v3.0 977
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene51229 SustainPine v3.0 260
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 4.959e-09
Internal
sp_v3.0_unigene52446 SustainPine v3.0 273
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene52869 SustainPine v3.0 322
AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene62709 SustainPine v3.0 166
AutoFact: Probable histone-binding protein Caf1 n=24 Tax=Coelomata RepID=CAF1_DROME 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75989 SustainPine v3.0 204
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.142e-09
N-terminus
sp_v3.0_unigene79564 SustainPine v3.0 330
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene94189 SustainPine v3.0 368
AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene126569 SustainPine v3.0 1318
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene126883 SustainPine v3.0 515
AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gb|AAK68773.1| Similar to dTDP-D-glu 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHM1 1.408e-08
Internal
sp_v3.0_unigene151858 SustainPine v3.0 220
AutoFact: UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase (ISS) [Ostreococcus tauri] emb|CAL58329.1| UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase (ISS) [Ostreococcus tauri] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHM1 1.649e-08
Internal
sp_v3.0_unigene152377 SustainPine v3.0 525
AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene159645 SustainPine v3.0 218
AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 6.427e-09
Internal
sp_v3.0_unigene163333 SustainPine v3.0 241
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 6.675e-10
Internal
sp_v3.0_unigene163525 SustainPine v3.0 397
AutoFact: UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] sp|Q9LH76.1|RHM3_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 3 dbj|BAB02645.1| unnamed protein product [Arabidopsis thaliana] gb|AAL84958.1| AT3g14790/T21E2_4 [Arabidopsis thaliana] gb|AAM98 2.0e-22
FL-Next: sp=Probable rhamnose biosynthetic enzyme 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RHM1 1.165e-08
N-terminus
sp_v3.0_unigene163686 SustainPine v3.0 141
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 4.755e-09
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain