Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to DNA damage stimulus

Term: GO:0006974  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2343 SustainPine v3.0 2205
AutoFact: Hexokinase 6 n=1 Tax=Nicotiana tabacum RepID=Q6Q8A0_TOBAC 0.0
FL-Next: sp=Hexokinase-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene3764 SustainPine v3.0 2271
AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair protein reca, putative 1.362e-11
Complete
sp_v3.0_unigene8661 SustainPine v3.0 2450
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene12456 SustainPine v3.0 3075
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene17851 SustainPine v3.0 620
AutoFact: 26S proteasome non-atpase regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9T6I9_RICCO 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit S5A 2.304e-09
C-terminus
sp_v3.0_unigene22761 SustainPine v3.0 895
AutoFact: putative mitotic arrest defective protein 2B [Oryza sativa Japonica Group] gb|EEE55135.1| hypothetical protein OsJ_02922 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene27795 SustainPine v3.0 1454
AutoFact: Swi3 multi-domain protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30991 SustainPine v3.0 437
AutoFact: Mitotic spindle assembly checkpoint protein MAD2B, putative n=1 Tax=Ricinus communis RepID=B9RI37_RICCO 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene32968 SustainPine v3.0 872
AutoFact: nudix hydrolase 1 [Arabidopsis thaliana] sp|Q9CA40.1|NUDT1_ARATH RecName: Full=Nudix hydrolase 1; Short=AtNUDT1; AltName: Full=Dihydroneopterin triphosphate pyrophosphohydrolase; Short=DHNTP pyrophosphohydrolase; AltName: Full=NADH pyrophosphatase gb|AAG5 2.00386e-43
FL-Next: sp=Nudix hydrolase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene37139 SustainPine v3.0 1233
AutoFact: DNA repair protein recA-like 1 [Arabidopsis thaliana] sp|Q39199.1|RECAC_ARATH RecName: Full=DNA repair protein recA homolog 1, chloroplastic; AltName: Full=Recombinase A homolog 1; Flags: Precursor gb|AAA61781.1| chloroplast DNA repair protein precursor [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RecA DNA recombinase 2.754e-08
Putative C-terminus
sp_v3.0_unigene64704 SustainPine v3.0 259
AutoFact: DNA repair protein reca, putative n=1 Tax=Ricinus communis RepID=B9RK79_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65049 SustainPine v3.0 159
AutoFact: thiazole biosynthetic enzyme [Pseudotsuga menziesii var. menziesii] 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme, chloroplastic 5.294e-13
Internal
sp_v3.0_unigene100900 SustainPine v3.0 257
AutoFact: [L] COG0468 RecA/RadA recombinase 1.0e-09
FL-Next: sp=DNA repair protein recA homolog 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene126583 SustainPine v3.0 699
AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair protein reca, putative 1.362e-11
Internal
sp_v3.0_unigene126902 SustainPine v3.0 771
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 8.723e-14
Putative N-terminus
sp_v3.0_unigene126979 SustainPine v3.0 921
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 2.447e-17
N-terminus
sp_v3.0_unigene127579 SustainPine v3.0 996
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 5.372e-25
C-terminus
sp_v3.0_unigene128006 SustainPine v3.0 762
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 3.627e-21
C-terminus
sp_v3.0_unigene141181 SustainPine v3.0 681
AutoFact: CCHC-type zinc finger protein-like n=3 Tax=Oryza sativa RepID=Q6Z6G7_ORYSJ 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142434 SustainPine v3.0 741
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Thiazole biosynthetic enzyme; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Thiazole biosynthetic enzyme 2.042e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain