Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of circadian rhythm

Term: GO:0042752  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2301 SustainPine v3.0 4162
AutoFact: Pseudo response regulator n=3 Tax=Populus RepID=B9HM08_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pseudo-response regulator 59 homologue 6.743e-09
Complete
sp_v3.0_unigene2615 SustainPine v3.0 2903
AutoFact: cullin-like protein1 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 2.754e-08
Complete
sp_v3.0_unigene3886 SustainPine v3.0 1314
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 0.0
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 1.071e-38
Complete
sp_v3.0_unigene6623 SustainPine v3.0 1233
AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6723 SustainPine v3.0 1477
AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 2.982e-30
Complete
sp_v3.0_unigene8134 SustainPine v3.0 2930
AutoFact: cullin-like protein1 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 2.754e-08
Complete
sp_v3.0_unigene16636 SustainPine v3.0 1702
AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 4.85e-21
C-terminus
sp_v3.0_unigene18980 SustainPine v3.0 475
AutoFact: [O] COG5647 Cullin, a subunit of E3 ubiquitin ligase 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 8.379e-08
Internal
sp_v3.0_unigene22201 SustainPine v3.0 367
AutoFact: Two-component response regulator ARR17 n=2 Tax=Arabidopsis RepID=ARR17_ARATH 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 3.277e-39
Internal
sp_v3.0_unigene30223 SustainPine v3.0 1606
AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene31733 SustainPine v3.0 786
AutoFact: Putative cullin [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 9.374e-08
N-terminus
sp_v3.0_unigene37177 SustainPine v3.0 274
AutoFact: cullin 1A [Nicotiana tabacum] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 6.254e-08
Internal
sp_v3.0_unigene39480 SustainPine v3.0 212
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene40310 SustainPine v3.0 132
AutoFact: cullin 1A [Nicotiana tabacum] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene40699 SustainPine v3.0 636
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-34
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 1.173e-38
Putative C-terminus
sp_v3.0_unigene49191 SustainPine v3.0 304
AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene50691 SustainPine v3.0 208
AutoFact: cullin 1C [Nicotiana tabacum] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 6.495e-08
Internal
sp_v3.0_unigene56162 SustainPine v3.0 381
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T5R6_PHYPA 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65427 SustainPine v3.0 246
AutoFact: Cullin-like protein n=2 Tax=Oryza sativa RepID=Q93VL5_ORYSJ 0.0001
FL-Next: tr=Putative uncharacterized protein Sb03g015010; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene67865 SustainPine v3.0 155
AutoFact: Plastid CUL1 n=1 Tax=Hevea brasiliensis RepID=D8V3L8_HEVBR 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain