Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: regulation of circadian rhythm

Term: GO:0042752  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene69255 SustainPine v3.0 290
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 9.0e-26
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 6.216e-39
Internal
sp_v3.0_unigene69302 SustainPine v3.0 149
AutoFact: cullin 1C [Nicotiana tabacum] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 5.558e-08
Internal
sp_v3.0_unigene70063 SustainPine v3.0 299
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72703 SustainPine v3.0 329
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-29
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 7.514e-39
Internal
sp_v3.0_unigene74619 SustainPine v3.0 206
AutoFact: Type A response regulator n=1 Tax=Selaginella moellendorffii RepID=D8SLQ9_SELML 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 1.459e-34
Internal
sp_v3.0_unigene75434 SustainPine v3.0 265
AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene124681 SustainPine v3.0 263
AutoFact: response regulator protein [Dianthus caryophyllus] 2.0e-12
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 4.484e-28
Putative C-terminus
sp_v3.0_unigene124789 SustainPine v3.0 412
AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.054e-08
Internal
sp_v3.0_unigene126865 SustainPine v3.0 807
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 1.275e-10
Internal
sp_v3.0_unigene126905 SustainPine v3.0 733
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene127059 SustainPine v3.0 642
AutoFact: cullin 1A [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene127950 SustainPine v3.0 815
AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene129477 SustainPine v3.0 585
AutoFact: Putative cullin [Oryza sativa] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin protein 5.815e-12
C-terminus
sp_v3.0_unigene130296 SustainPine v3.0 410
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 9.447e-08
Internal
sp_v3.0_unigene132469 SustainPine v3.0 459
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133439 SustainPine v3.0 402
AutoFact: Putative cullin [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.636e-08
Internal
sp_v3.0_unigene138240 SustainPine v3.0 263
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene140568 SustainPine v3.0 577
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.612e-08
Internal
sp_v3.0_unigene142749 SustainPine v3.0 470
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene161523 SustainPine v3.0 429
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.636e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain