Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: short-day photoperiodism, flowering

Term: GO:0048575  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2136 SustainPine v3.0 1621
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.756e-14
C-terminus
sp_v3.0_unigene2485 SustainPine v3.0 3456
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.136e-11
Complete
sp_v3.0_unigene4075 SustainPine v3.0 1942
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 1.052e-13
C-terminus
sp_v3.0_unigene7300 SustainPine v3.0 1634
AutoFact: Gibberellin 20-oxidase n=1 Tax=Helianthus annuus RepID=B2G4V7_HELAN 0.0
FL-Next: sp=Gibberellin 20 oxidase 1-B; Triticum aestivum (Wheat). 0.0
Sma3: Gibberellin 20-oxidase 0.0
Complete
sp_v3.0_unigene24662 SustainPine v3.0 382
AutoFact: Putative giberellin beta-hydroxylase n=2 Tax=Arabidopsis RepID=Q9ZQA5_ARATH 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GA C20oxidase2 7.325e-12
Internal
sp_v3.0_unigene34729 SustainPine v3.0 661
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene34970 SustainPine v3.0 794
AutoFact: Gibberellin 20 oxidase, putative n=1 Tax=Ricinus communis RepID=B9RZI6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 5.318e-13
C-terminus
sp_v3.0_unigene44186 SustainPine v3.0 753
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.985e-15
N-terminus
sp_v3.0_unigene45708 SustainPine v3.0 148
AutoFact: Unassigned protein
FL-Next: sp=Protein SUPPRESSOR OF PHYA-105 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 1.987e-11
Internal
sp_v3.0_unigene72992 SustainPine v3.0 294
AutoFact: pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin 20-oxidase 5.78e-36
Internal
sp_v3.0_unigene80700 SustainPine v3.0 273
AutoFact: Gibberellin 20-oxidase n=1 Tax=Helianthus annuus RepID=B2G4V8_HELAN 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin 20-oxidase 0.0
Internal
sp_v3.0_unigene106028 SustainPine v3.0 271
AutoFact: COP1 like protein [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.033e-11
Putative N-terminus
sp_v3.0_unigene106556 SustainPine v3.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 7.641e-14
Putative N-terminus
sp_v3.0_unigene120678 SustainPine v3.0 269
AutoFact: Ubiquitin ligase protein cop1, putative n=1 Tax=Ricinus communis RepID=B9T5N2_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 4.548e-11
Internal
sp_v3.0_unigene195459 SustainPine v3.0 262
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.451e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain