Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to red light

Term: GO:0010114  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2136 SustainPine v3.0 1621
• AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 8.756e-14
C-terminus
sp_v3.0_unigene2479 SustainPine v3.0 1177
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene2485 SustainPine v3.0 3456
• AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 9.136e-11
Complete
sp_v3.0_unigene3467 SustainPine v3.0 2205
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene3656 SustainPine v3.0 1488
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 1.09596e-41
C-terminus
sp_v3.0_unigene3886 SustainPine v3.0 1314
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 0.0
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Sma3: Type-a response regulator 1.071e-38
Complete
sp_v3.0_unigene4075 SustainPine v3.0 1942
• AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 1.052e-13
C-terminus
sp_v3.0_unigene4289 SustainPine v3.0 525
• AutoFact: Os02g0203000 protein n=2 Tax=Oryza sativa RepID=Q0E2Y8_ORYSJ 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor HY5 1.887e-18
Putative Complete
sp_v3.0_unigene4337 SustainPine v3.0 1194
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene4670 SustainPine v3.0 831
• AutoFact: Carotenoid cleavage dioxygenase 4a n=1 Tax=Citrus clementina RepID=A0SE35_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 2.733e-22
Putative N-terminus
sp_v3.0_unigene4941 SustainPine v3.0 648
• AutoFact: cytochrome P450 [Pyrus communis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450, putative 5.694e-24
C-terminus
sp_v3.0_unigene6057 SustainPine v3.0 2091
• AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.729e-08
Complete
sp_v3.0_unigene6723 SustainPine v3.0 1477
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-a response regulator 2.982e-30
Complete
sp_v3.0_unigene6729 SustainPine v3.0 1578
• AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
• FL-Next: sp=ABC transporter I family member 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ABC transporter family protein 7.849e-06
Complete
sp_v3.0_unigene7783 SustainPine v3.0 1131
• AutoFact: Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI 0.0
• FL-Next: sp=Cytochrome P450 716B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 5.304e-33
C-terminus
sp_v3.0_unigene7865 SustainPine v3.0 2209
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene7981 SustainPine v3.0 681
• AutoFact: gibberellin 2-oxidase [Populus alba x Populus tremuloides] 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gibberellin 2-oxidase 2.938e-37
C-terminus
sp_v3.0_unigene8245 SustainPine v3.0 1201
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene8765 SustainPine v3.0 1483
• AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 1.03e-30
Complete
sp_v3.0_unigene8845 SustainPine v3.0 991
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain