Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to red light

Term: GO:0010114  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene34147 SustainPine v3.0 1098
AutoFact: NAC, putative n=4 Tax=Arabidopsis RepID=Q9SQY1_ARATH 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene34237 SustainPine v3.0 2013
AutoFact: basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.276e-20
Putative Complete
sp_v3.0_unigene34729 SustainPine v3.0 661
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene35549 SustainPine v3.0 413
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene35915 SustainPine v3.0 1917
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene36428 SustainPine v3.0 752
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 0.0
C-terminus
sp_v3.0_unigene37001 SustainPine v3.0 344
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light-induced protein 6.378e-19
C-terminus
sp_v3.0_unigene37893 SustainPine v3.0 2680
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene40101 SustainPine v3.0 1497
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.34e-07
Internal
sp_v3.0_unigene40699 SustainPine v3.0 636
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-34
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 1.173e-38
Putative C-terminus
sp_v3.0_unigene40723 SustainPine v3.0 1724
AutoFact: abscisic acid 8'-hydroxylase 1 [Arabidopsis thaliana] sp|Q949P1.1|ABAH1_ARATH RecName: Full=Abscisic acid 8'-hydroxylase 1; Short=ABA 8'-hydroxylase 1; AltName: Full=Cytochrome P450 707A1 gb|AAK93657.1| putative cytochrome P450 protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Abscisic acid 8'-hydroxylase 1.253e-14
Complete
sp_v3.0_unigene44186 SustainPine v3.0 753
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.985e-15
N-terminus
sp_v3.0_unigene45708 SustainPine v3.0 148
AutoFact: Unassigned protein
FL-Next: sp=Protein SUPPRESSOR OF PHYA-105 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 1.987e-11
Internal
sp_v3.0_unigene49965 SustainPine v3.0 516
AutoFact: Abscisic acid 8'-hydroxylase 1 n=3 Tax=Arabidopsis RepID=ABAH1_ARATH 0.0
FL-Next: sp=Taxoid 14-beta-hydroxylase; Taxus cuspidata (Japanese yew). 0.0
Sma3: Abscisic acid 8'-hydroxylase 1.181e-14
Internal
sp_v3.0_unigene49978 SustainPine v3.0 575
AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene50709 SustainPine v3.0 162
AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic n=3 Tax=Camelineae RepID=NCED6_ARATH 1.0e-10
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 6.686e-08
Internal
sp_v3.0_unigene50736 SustainPine v3.0 197
AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic n=2 Tax=Arabidopsis RepID=NCED2_ARATH 2.0e-21
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 6.352e-36
Internal
sp_v3.0_unigene51338 SustainPine v3.0 554
AutoFact: Gibberellin 2-oxidase n=1 Tax=Malus x domestica RepID=D7F2B1_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gibberellin 2-oxidase 0.0
Internal
sp_v3.0_unigene55577 SustainPine v3.0 366
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.115e-27
Internal
sp_v3.0_unigene56337 SustainPine v3.0 333
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain