Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to red light

Term: GO:0010114  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9346 SustainPine v3.0 1449
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene9582 SustainPine v3.0 2223
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9630 SustainPine v3.0 1229
AutoFact: abscisic acid 8'-hydroxylase 3 [Arabidopsis thaliana] sp|Q9FH76.1|ABAH3_ARATH RecName: Full=Abscisic acid 8'-hydroxylase 3; Short=ABA 8'-hydroxylase 3; AltName: Full=Cytochrome P450 707A3 dbj|BAB10255.1| cytochrome P450 [Arabidopsis thaliana] gb|AAL57698. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Abscisic acid 8'-hydroxylase 1.58e-14
Complete
sp_v3.0_unigene9687 SustainPine v3.0 1201
AutoFact: Alpha-expansin 13, putative n=1 Tax=Ricinus communis RepID=B9SKR9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene10089 SustainPine v3.0 757
AutoFact: DUF640 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gb|AAC63835.1 2.44e-08
N-terminus
sp_v3.0_unigene11469 SustainPine v3.0 3020
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene11521 SustainPine v3.0 1373
AutoFact: Expansin n=1 Tax=Vicia faba RepID=A2IBX3_VICFA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene11907 SustainPine v3.0 2444
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene12961 SustainPine v3.0 865
AutoFact: Actin-75 n=1 Tax=Solanum tuberosum RepID=ACT7_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.276e-32
C-terminus
sp_v3.0_unigene13661 SustainPine v3.0 723
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.12398e-41
C-terminus
sp_v3.0_unigene14485 SustainPine v3.0 2378
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AAO39425.1| phytochrome and flowering time 1 protein [Arabidopsis thaliana] gb|AEE30639.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene14818 SustainPine v3.0 1598
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 3.005e-40
N-terminus
sp_v3.0_unigene17379 SustainPine v3.0 1917
AutoFact: DUF640 domain containing protein 0.0
FL-Next: tr=G1-like protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Gb|AAC63835.1 2.409e-08
Complete
sp_v3.0_unigene17705 SustainPine v3.0 967
AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene18319 SustainPine v3.0 2836
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene18459 SustainPine v3.0 854
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene19054 SustainPine v3.0 530
AutoFact: Actin (Fragment) n=4 Tax=core eudicotyledons RepID=A7LHF2_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.602e-11
Internal
sp_v3.0_unigene20787 SustainPine v3.0 1194
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene20846 SustainPine v3.0 1028
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene21228 SustainPine v3.0 845
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ELIP 2.23e-21
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain