Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: negative regulation of photomorphogenesis

Term: GO:0010100  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene153632 SustainPine v3.0 398
• AutoFact: similar to JAB; K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-] 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 5b 8.858e-09
Internal
sp_v3.0_unigene157168 SustainPine v3.0 427
• AutoFact: Cullin n=1 Tax=Chlamydomonas reinhardtii RepID=A8JHY5_CHLRE 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 4.19e-15
Complete
sp_v3.0_unigene157975 SustainPine v3.0 556
• AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH 0.0
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene159380 SustainPine v3.0 125
• AutoFact: Putative cullin protein (Fragment) n=1 Tax=Olea europaea RepID=Q93YY3_OLEEU 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 1.056e-13
Internal
sp_v3.0_unigene164940 SustainPine v3.0 375
• AutoFact: bHLH transcription factor PTF1 [Zea mays] gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.949e-20
Internal
sp_v3.0_unigene165453 SustainPine v3.0 324
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184472 SustainPine v3.0 341
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene192883 SustainPine v3.0 341
• AutoFact: Cullin-3 n=1 Tax=Dictyostelium discoideum RepID=CUL3_DICDI 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 1.233e-10
C-terminus
sp_v3.0_unigene195459 SustainPine v3.0 262
• AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 8.451e-11
Internal
sp_v3.0_unigene203553 SustainPine v3.0 494
• AutoFact: Cullin 1A n=2 Tax=Nicotiana tabacum RepID=Q711G8_TOBAC 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 6.866e-12
C-terminus
sp_v3.0_unigene208586 SustainPine v3.0 541
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 3.22e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain