Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: early endosome

Term: GO:0005769  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2092 SustainPine v3.0 2211
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10156 SustainPine v3.0 906
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 6.877e-36
N-terminus
sp_v3.0_unigene19563 SustainPine v3.0 655
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab5/RabF-family small GTPase 6.452e-11
N-terminus
sp_v3.0_unigene20246 SustainPine v3.0 3599
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: sp=Endoglucanase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Endo-1,4-beta-glucanase 1.069e-38
Complete
sp_v3.0_unigene28036 SustainPine v3.0 619
AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 3.0e-20
FL-Next: tr=Membrane-bound endo-1,4-beta-glucanase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Endo-1,4-beta-glucanase 8.93e-17
C-terminus
sp_v3.0_unigene31639 SustainPine v3.0 510
AutoFact: Rab GTPase n=2 Tax=Dictyosteliida RepID=D3BBG2_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 1.741e-16
C-terminus
sp_v3.0_unigene38985 SustainPine v3.0 693
AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 0.0
FL-Next: tr=Endoglucanase; Pinus taeda (Loblolly pine). 0.0
Sma3: Endo-1,4-beta-glucanase 3.62e-17
Putative N-terminus
sp_v3.0_unigene58326 SustainPine v3.0 345
AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 1.309e-12
C-terminus
sp_v3.0_unigene67575 SustainPine v3.0 293
AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 3.0e-25
FL-Next: tr=Endoglucanase; Pinus taeda (Loblolly pine). 0.0
Sma3: Endo-1,4-beta-glucanase 2.437e-17
Putative N-terminus
sp_v3.0_unigene73608 SustainPine v3.0 324
AutoFact: Endo-1,4-beta-glucanase n=2 Tax=Pooideae RepID=Q8RWR6_WHEAT 4.0e-31
FL-Next: tr=Membrane-bound endo-1,4-beta-glucanase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Endo-1,4-beta-glucanase 6.994e-17
Internal
sp_v3.0_unigene76915 SustainPine v3.0 256
AutoFact: Ras-related small GTPase Rab5 n=1 Tax=Gymnochlora stellata RepID=B5A4M2_GYMST 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab5/RabF-family small GTPase 6.934e-11
Internal
sp_v3.0_unigene81241 SustainPine v3.0 112
AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 5.0e-13
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 4.721e-40
Internal
sp_v3.0_unigene114075 SustainPine v3.0 454
AutoFact: RecName: Full=Endoglucanase 7; AltName: Full=Endo-1,4-beta glucanase 7; AltName: Full=OsGLU10; Flags: Precursor dbj|BAD16040.1| putative endo-beta-1,4-glucanase precursor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-1,4-beta-glucanase, putative 5.162e-35
Internal
sp_v3.0_unigene118112 SustainPine v3.0 282
AutoFact: Glycoside transferase, six-hairpin, subgroup n=1 Tax=Medicago truncatula RepID=Q2HSS5_MEDTR 4.0e-22
FL-Next: tr=Membrane-bound endo-1,4-beta-glucanase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Endo-1,4-beta-glucanase 1.592e-21
Internal
sp_v3.0_unigene129510 SustainPine v3.0 406
AutoFact: Endoglucanase n=2 Tax=Pinaceae RepID=A6N838_PINTA 4.0e-39
FL-Next: tr=Endoglucanase; Pinus taeda (Loblolly pine). 0.0
Sma3: Endo-1,4-beta-glucanase 4.092e-18
Internal
sp_v3.0_unigene151668 SustainPine v3.0 242
AutoFact: GTP-binding protein RAB5 n=2 Tax=Agaricales RepID=A6ZIF4_LENED 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plant-unique Rab5 homolog 2.852e-12
Internal
sp_v3.0_unigene154728 SustainPine v3.0 357
AutoFact: PREDICTED: similar to RAB22A, member RAS oncogene family [Strongylocentrotus purpuratus] ref|XP_001176279.1| PREDICTED: similar to RAB22A, member RAS oncogene family [Strongylocentrotus purpuratus] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11A 4.977e-15
N-terminus
sp_v3.0_unigene156338 SustainPine v3.0 444
AutoFact: PREDICTED: ras-related protein Rab-5C-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791863 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 2.057e-11
N-terminus
sp_v3.0_unigene156665 SustainPine v3.0 122
AutoFact: GTP-binding protein ypt5 [Aspergillus terreus NIH2624] gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab5/RabF-family small GTPase 2.812e-11
Internal
sp_v3.0_unigene157767 SustainPine v3.0 392
AutoFact: Ras-related protein Rab-5A n=7 Tax=Eutheria RepID=RAB5A_PIG 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11A 1.03e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain