Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription initiation factor activity

Term: GO:0016986  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2081 SustainPine v3.0 2345
• AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene6260 SustainPine v3.0 2445
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Os01g0510800 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor tfiid, putative 3.309e-08
Complete
sp_v3.0_unigene7185 SustainPine v3.0 2963
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Os03g0441000 protein 9.26e-06
C-terminus
sp_v3.0_unigene7407 SustainPine v3.0 1610
• AutoFact: TATA binding protein associated factor [Solanum tuberosum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene10101 SustainPine v3.0 2664
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 2.634e-26
C-terminus
sp_v3.0_unigene18084 SustainPine v3.0 913
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transcription initiation factor, putative 9.277e-10
C-terminus
sp_v3.0_unigene42678 SustainPine v3.0 304
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 2.0e-38
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.804e-34
N-terminus
sp_v3.0_unigene42818 SustainPine v3.0 750
• AutoFact: TATA binding protein associated factor [Solanum tuberosum] 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene52419 SustainPine v3.0 399
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 9.0e-29
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 1.787e-26
N-terminus
sp_v3.0_unigene63028 SustainPine v3.0 156
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 4.0e-20
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 4.43e-24
Internal
sp_v3.0_unigene66377 SustainPine v3.0 424
• AutoFact: Transcription initiation factor TFIID subunit A [Arabidopsis thaliana] ref|NP_849680.1| Transcription initiation factor TFIID subunit A [Arabidopsis thaliana] gb|AAL07223.1| unknown protein [Arabidopsis thaliana] gb|AAM14362.1| unknown protein [Arabidopsi 2.0e-08
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene67246 SustainPine v3.0 436
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 1.0e-11
• FL-Next: tr=Transcription initiation factor TFIID subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene95271 SustainPine v3.0 264
• AutoFact: Queuine tRNA-ribosyltransferase (Fragment) n=3 Tax=rosids RepID=E0CRP9_VITVI 3.0e-39
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.335e-34
Internal
sp_v3.0_unigene100212 SustainPine v3.0 357
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene100334 SustainPine v3.0 476
• AutoFact: transcription initiation factor IID (TFIID) subunit A-like protein [Oryza sativa Japonica Group] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene109765 SustainPine v3.0 181
• AutoFact: Queuine tRNA-ribosyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TIB7_PHYPA 2.0e-15
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 1.787e-26
Internal
sp_v3.0_unigene150135 SustainPine v3.0 411
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 8.00001e-41
• FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 9.447e-27
Internal
sp_v3.0_unigene154461 SustainPine v3.0 444
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 2.0e-34
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 3.963e-25
Putative C-terminus
sp_v3.0_unigene164104 SustainPine v3.0 341
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.804e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain