Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ion transport

Term: GO:0006811  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1967 SustainPine v3.0 1085
AutoFact: Gly_rich multi-domain protein 4.0e-17
Sma3: Glycine-rich protein 4.555e-14
coding
sp_v3.0_unigene2025 SustainPine v3.0 1123
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 2.323e-17
C-terminus
sp_v3.0_unigene2497 SustainPine v3.0 3807
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 4.333e-36
Complete
sp_v3.0_unigene4656 SustainPine v3.0 664
AutoFact: glutamate receptor [Malus hupehensis] 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 8.813e-15
Internal
sp_v3.0_unigene4868 SustainPine v3.0 484
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inward rectifying potassium channel 3.607e-11
Internal
sp_v3.0_unigene4874 SustainPine v3.0 718
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 6.109e-06
Internal
sp_v3.0_unigene4949 SustainPine v3.0 589
AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 1.4013e-45
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene4956 SustainPine v3.0 757
AutoFact: Predicted protein n=4 Tax=Hordeum vulgare RepID=F2CT39_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 2.406e-33
Internal
sp_v3.0_unigene4963 SustainPine v3.0 921
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5XA39_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.002e-19
Putative Complete
sp_v3.0_unigene5675 SustainPine v3.0 1624
AutoFact: Voltage-dependent calcium channel protein TPC1 n=2 Tax=Andropogoneae RepID=B6SP34_MAIZE 0.0
FL-Next: sp=Two pore calcium channel protein 1; Triticum aestivum (Wheat). 0.0
Sma3: Voltage-dependent calcium channel protein TPC1 4.836e-16
C-terminus
sp_v3.0_unigene5701 SustainPine v3.0 1415
AutoFact: Putative cyclic nucleotide-gated cation channel n=1 Tax=Sandersonia aurantiaca RepID=B1PJP3_SANAU 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 3.62e-24
C-terminus
sp_v3.0_unigene7289 SustainPine v3.0 1442
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 3.0e-32
FL-Next: sp=Potassium channel KOR1; Oryza sativa subsp. japonica (Rice). 0.0
Misassembled
sp_v3.0_unigene7397 SustainPine v3.0 2925
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 5.141e-36
Complete
sp_v3.0_unigene7659 SustainPine v3.0 1030
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 8.316e-27
C-terminus
sp_v3.0_unigene7772 SustainPine v3.0 1453
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.53e-17
C-terminus
sp_v3.0_unigene9113 SustainPine v3.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.172e-30
Internal
sp_v3.0_unigene9152 SustainPine v3.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene9407 SustainPine v3.0 1602
AutoFact: potassium channel TORK1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.032e-08
C-terminus
sp_v3.0_unigene10124 SustainPine v3.0 357
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SF64_RICCO 1.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene10765 SustainPine v3.0 888
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 4.915e-17
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain