Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71154 SustainPine v3.0 228
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 2.0e-25
FL-Next: sp=Chaperone protein ClpB3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chaperone, Hsp100 family, clpb-type 2.689e-08
Internal
sp_v3.0_unigene72572 SustainPine v3.0 314
AutoFact: ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] sp|Q9S834.1|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; AltName: Full=Endopeptidase ClpP5; Short=nClpP5; AltName: Full=nClpP1; Flags: Precur 1.4013e-45
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene75094 SustainPine v3.0 346
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorella variabilis RepID=E1Z8L1_9CHLO 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene77028 SustainPine v3.0 223
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTR6_PICSI 2.0e-24
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 1.247e-17
Internal
sp_v3.0_unigene77195 SustainPine v3.0 206
AutoFact: RNAse E/G-like protein n=8 Tax=Arabidopsis RepID=F4IV66_ARATH 7.0e-12
FL-Next: tr=RNAse E/G-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative ribonuclease E 9.576e-10
Internal
sp_v3.0_unigene79086 SustainPine v3.0 207
AutoFact: [O] COG0542 ATPases with chaperone activity, ATP-binding subunit 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.888e-16
Internal
sp_v3.0_unigene80098 SustainPine v3.0 104
AutoFact: Non-discriminatory gln-glu-trna synthetase n=1 Tax=Chlamydomonas reinhardtii RepID=A8I629_CHLRE 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamyl-tRNA synthetase 9.93e-11
Internal
sp_v3.0_unigene80470 SustainPine v3.0 212
AutoFact: ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone, Hsp100 family, clpb-type 4.463e-08
N-terminus
sp_v3.0_unigene81320 SustainPine v3.0 220
AutoFact: Heat shock protein n=1 Tax=Glycine max RepID=Q39889_SOYBN 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.587e-16
Internal
sp_v3.0_unigene93895 SustainPine v3.0 1099
AutoFact: pfam00153, Mito_carr, Mitochondrial carrier protein 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine transporter 2.651e-12
Putative Complete
sp_v3.0_unigene99040 SustainPine v3.0 584
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RLP7_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.443e-16
Putative N-terminus
sp_v3.0_unigene100919 SustainPine v3.0 466
AutoFact: Non-discriminatory gln-glu-trna synthetase n=1 Tax=Chlamydomonas reinhardtii RepID=A8I629_CHLRE 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamyl-tRNA synthetase 4.775e-11
N-terminus
sp_v3.0_unigene101285 SustainPine v3.0 913
AutoFact: DUF1092 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tab2 protein 8.693e-10
C-terminus
sp_v3.0_unigene103907 SustainPine v3.0 514
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene104309 SustainPine v3.0 556
AutoFact: Os05g0315100 protein n=2 Tax=Oryza sativa RepID=Q0DJ89_ORYSJ 7.9874e-44
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121568 SustainPine v3.0 263
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 2.0e-25
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121666 SustainPine v3.0 421
AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 2.0e-33
FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
Sma3: Ribonuclease II-like protein 1.111e-09
Internal
sp_v3.0_unigene128051 SustainPine v3.0 1041
AutoFact: Heat shock protein n=1 Tax=Glycine max RepID=Q39889_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 1.318e-11
Putative C-terminus
sp_v3.0_unigene128392 SustainPine v3.0 642
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9P1N5_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus
sp_v3.0_unigene129105 SustainPine v3.0 402
AutoFact: RNAse E/G-like protein [Arabidopsis thaliana] gb|AAM13212.1| putative ribonuclease E [Arabidopsis thaliana] gb|AAP68232.1| At2g04270 [Arabidopsis thaliana] gb|AEC05814.1| RNAse E/G-like protein [Arabidopsis thaliana] 4.06377e-44
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative ribonuclease E 2.076e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain