Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nitrate assimilation

Term: GO:0042128  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene118666 SustainPine v3.0 345
• AutoFact: Glutamine synthetase n=2 Tax=Schizophyllum commune RepID=D8PPX2_SCHCM 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
N-terminus
sp_v3.0_unigene119922 SustainPine v3.0 388
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene121753 SustainPine v3.0 550
• AutoFact: RWP-RK domain containing protein 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RWP-RK domain containing protein, expressed 3.252e-12
Internal
sp_v3.0_unigene135153 SustainPine v3.0 294
• AutoFact: Nitrate reductase [NAD(P)H] n=1 Tax=Betula pendula RepID=NIA_BETPN 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NR 0.0
Internal
sp_v3.0_unigene141769 SustainPine v3.0 385
• AutoFact: SNF1 kinase complex anchoring protein [Solanum lycopersicum] 1.0e-23
• FL-Next: sp=SNF1-related protein kinase regulatory subunit beta-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF1-related protein kinase regulatory subunit beta-1 2.694e-08
Internal
sp_v3.0_unigene144502 SustainPine v3.0 878
• AutoFact: glutamine synthetase root isozyme 4 [Zea mays] sp|P38562.1|GLNA4_MAIZE RecName: Full=Glutamine synthetase root isozyme 4; AltName: Full=GS107; AltName: Full=Glutamate--ammonia ligase emb|CAA46722.1| glutamine synthetase [Zea mays] 7.0e-29
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene145356 SustainPine v3.0 268
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 2.0e-38
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Internal
sp_v3.0_unigene147656 SustainPine v3.0 999
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147659 SustainPine v3.0 706
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 1.0e-18
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147662 SustainPine v3.0 603
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147663 SustainPine v3.0 507
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 3.00018e-42
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Putative N-terminus
sp_v3.0_unigene147664 SustainPine v3.0 501
• AutoFact: Cytosolic glutamine synthetase (Fragment) n=1 Tax=Daucus carota RepID=O22505_DAUCA 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147666 SustainPine v3.0 541
• AutoFact: Glutamine synthetase cytosolic isozyme 1 n=35 Tax=Spermatophyta RepID=GLNA1_VITVI 9.94922e-44
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene150526 SustainPine v3.0 418
• AutoFact: nitrate transporter [Brassica napus] 4.0e-07
• FL-Next: sp=Nitrate transporter 1.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Nitrate transporter 2.191e-20
C-terminus
sp_v3.0_unigene150696 SustainPine v3.0 399
• AutoFact: Glutamine synthetase n=2 Tax=Sclerotiniaceae RepID=A6SGX0_BOTFB 2.0e-33
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene152157 SustainPine v3.0 336
• AutoFact: NADH-cytochrome b5 reductase 2 [Xenopus laevis] sp|Q5PQA4.1|NB5R2_XENLA RecName: Full=NADH-cytochrome b5 reductase 2; Short=b5R.2 gb|AAH87294.1| Cyb5r2 protein [Xenopus laevis] 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome b5 reductase 1.901e-11
Internal
sp_v3.0_unigene154175 SustainPine v3.0 553
• AutoFact: Nitrate reductase n=1 Tax=Pseudochlorella sp. CCAP 211/1A RepID=Q84LQ4_CHLEL 6.0e-09
• FL-Next: sp=Nitrate reductase; Chlorella ellipsoidea. 0.0
Putative C-terminus
sp_v3.0_unigene160626 SustainPine v3.0 512
• AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene183724 SustainPine v3.0 748
• AutoFact: SNF1-related protein kinase regulatory subunit gamma 1 [Arabidopsis thaliana] sp|Q8LBB2.2|KING1_ARATH RecName: Full=SNF1-related protein kinase regulatory subunit gamma 1; Short=AKIN subunit gamma-1; Short=AKING1 emb|CAB62342.1| putative protein [Arabidop 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AKIN gamma 3.441e-09
C-terminus
sp_v3.0_unigene186097 SustainPine v3.0 523
• AutoFact: Cytochrome b5 n=1 Tax=Camellia sinensis RepID=F4YFE3_CAMSI 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain