Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ion channel activity

Term: GO:0005216  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53798 SustainPine v3.0 380
AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.263e-33
Internal
sp_v3.0_unigene54271 SustainPine v3.0 317
AutoFact: RecName: Full=Potassium channel KOR1; AltName: Full=K(+) outward-rectifying channel 1 dbj|BAD45736.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] dbj|BAD45977.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.159e-08
Internal
sp_v3.0_unigene54365 SustainPine v3.0 471
AutoFact: Potassium channel beta subunit n=3 Tax=Pooideae RepID=E7BXE5_9POAL 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel beta subunit 9.341e-09
Internal
sp_v3.0_unigene56653 SustainPine v3.0 180
AutoFact: Opsin-1 n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E8I6_SCLS1 6.0e-16
FL-Next: tr=Putative opsin; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Putative opsin 2.437e-06
Putative C-terminus
sp_v3.0_unigene56987 SustainPine v3.0 456
AutoFact: opsin [Leptosphaeria maculans] gb|ADB03112.1| Mac [synthetic construct] 7.0e-23
FL-Next: tr=Putative opsin; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Putative opsin 2.437e-06
Putative N-terminus
sp_v3.0_unigene59918 SustainPine v3.0 442
AutoFact: cyclic nucleotide-gated ion channel 2 [Hordeum vulgare subsp. vulgare] 4.0e-06
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene62492 SustainPine v3.0 230
AutoFact: cyclic nucleotide and calmodulin-regulated ion channel-like protein [Arabidopsis thaliana] 6.0e-23
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 5.841e-23
Internal
sp_v3.0_unigene63377 SustainPine v3.0 217
AutoFact: AKT1-like K+ channel LilKT1 n=1 Tax=Lilium longiflorum RepID=A3RG92_LILLO 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 6.912e-25
Internal
sp_v3.0_unigene70314 SustainPine v3.0 357
AutoFact: potassium channel [Solanum tuberosum] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 4.771e-28
Internal
sp_v3.0_unigene73851 SustainPine v3.0 190
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 3.0e-07
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75132 SustainPine v3.0 388
AutoFact: potassium channel [Solanum tuberosum] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 3.582e-21
Internal
sp_v3.0_unigene76211 SustainPine v3.0 390
AutoFact: Opsin-1 n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E8I6_SCLS1 0.0
FL-Next: tr=Putative opsin; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Putative opsin 2.437e-06
Putative C-terminus
sp_v3.0_unigene77956 SustainPine v3.0 300
AutoFact: inwardly rectifying potassium channel subunit [Daucus carota] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel AKT1 1.842e-07
Internal
sp_v3.0_unigene79160 SustainPine v3.0 224
AutoFact: Inwardly rectifying potassium channel subunit n=1 Tax=Daucus carota RepID=Q6ZXS4_DAUCA 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative AKT1-like potassium channel 4.885e-08
Internal
sp_v3.0_unigene79461 SustainPine v3.0 250
AutoFact: RecName: Full=Potassium channel KOR1; AltName: Full=K(+) outward-rectifying channel 1 dbj|BAD45736.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] dbj|BAD45977.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79563 SustainPine v3.0 251
AutoFact: cyclic nucleotide and calmodulin-regulated ion channel-like protein [Arabidopsis thaliana] 2.0e-32
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 1.3e-22
Internal
sp_v3.0_unigene83002 SustainPine v3.0 461
Sma3: Cyclic nucleotide-gated ion channel, putative 2.633e-08
coding
sp_v3.0_unigene85799 SustainPine v3.0 403
AutoFact: PREDICTED: similar to Ca/calmodulin-dependent protein kinase phosphatase-N [Nasonia vitripennis] 6.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.276e-12
coding
sp_v3.0_unigene85926 SustainPine v3.0 265
AutoFact: Trypan_PARP multi-domain protein 9.0e-16
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.186e-19
coding
sp_v3.0_unigene94835 SustainPine v3.0 448
AutoFact: splicing factor Prp18-like protein [Arabidopsis thaliana] gb|AAD25794.1|AC006550_2 Similar to gb|U51990 pre-mRNA-splicing factor hPrp18 from Homo sapiens. ESTs gb|T46391 and gb|AA721815 come from this gene [Arabidopsis thaliana] gb|AAK25940.1|AF360230_1 u 1.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Prp18 domain containing protein 2.953e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain