Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ion channel activity

Term: GO:0005216  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11614 SustainPine v3.0 2395
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 8.887e-20
Complete
sp_v3.0_unigene13396 SustainPine v3.0 3562
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|O82226.2|CNGC6_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 6; Short=AtCNGC6; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 6 emb|CAB40131.1| cyclic nucl 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 5.935e-36
Putative Complete
sp_v3.0_unigene14525 SustainPine v3.0 486
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene17278 SustainPine v3.0 501
AutoFact: Trypan_PARP multi-domain protein 3.0e-16
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 2.657e-20
coding
sp_v3.0_unigene18903 SustainPine v3.0 955
AutoFact: Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 9.916e-34
Internal
sp_v3.0_unigene19081 SustainPine v3.0 366
AutoFact: Potassium channel n=3 Tax=Andropogoneae RepID=O04242_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.244e-13
Internal
sp_v3.0_unigene22062 SustainPine v3.0 560
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 8.0e-21
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.62e-06
C-terminus
sp_v3.0_unigene22420 SustainPine v3.0 1101
AutoFact: Drf_FH1 multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 8.155e-17
coding
sp_v3.0_unigene22951 SustainPine v3.0 1381
AutoFact: two pore calcium channel protein 1 [Arabidopsis thaliana] sp|Q94KI8.1|TPC1_ARATH RecName: Full=Two pore calcium channel protein 1; AltName: Full=Calcium channel protein 1; Short=AtCCH1; AltName: Full=Fatty acid oxygenation up-regulated protein 2; AltName: 0.0
FL-Next: sp=Two pore calcium channel protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative two pore calcium channel 1.129e-16
N-terminus
sp_v3.0_unigene24643 SustainPine v3.0 566
AutoFact: oxidoreductase, aldo/keto reductase family protein [Tetrahymena thermophila] gb|EAS04345.1| oxidoreductase, aldo/keto reductase family protein [Tetrahymena thermophila SB210] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel beta subunit 2.315e-13
N-terminus
sp_v3.0_unigene25669 SustainPine v3.0 450
AutoFact: Potassium channel regulatory factor n=1 Tax=Metarhizium anisopliae ARSEF 23 RepID=E9F9J5_METAR 6.99949e-42
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Prp18 domain containing protein 2.304e-09
C-terminus
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene29299 SustainPine v3.0 743
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene29458 SustainPine v3.0 1097
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 2.375e-19
coding
sp_v3.0_unigene29500 SustainPine v3.0 859
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 8.0e-09
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene29619 SustainPine v3.0 637
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 1.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.757e-14
coding
sp_v3.0_unigene29675 SustainPine v3.0 1026
AutoFact: Drf_FH1 multi-domain protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich protein 2.6e-19
Complete
sp_v3.0_unigene29868 SustainPine v3.0 936
AutoFact: Gly_rich multi-domain protein 8.0e-18
Sma3: Glycine-rich protein 3.365e-14
coding
sp_v3.0_unigene33255 SustainPine v3.0 1082
AutoFact: Gly_rich multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 2.968e-14
coding
sp_v3.0_unigene33554 SustainPine v3.0 945
AutoFact: Trypan_PARP multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 1.132e-16
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain