Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: meristem development

Term: GO:0048507  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1568 SustainPine v3.0 3619
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene2653 SustainPine v3.0 1788
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 8.073e-26
C-terminus
sp_v3.0_unigene3335 SustainPine v3.0 1709
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA helicase, TBP-interacting protein 5.005e-12
Complete
sp_v3.0_unigene4609 SustainPine v3.0 582
AutoFact: cytokinin oxidase [Arabidopsis thaliana] 0.0
FL-Next: sp=Cytokinin dehydrogenase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytokinin oxidase 8.832e-39
Internal
sp_v3.0_unigene5710 SustainPine v3.0 2439
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene5897 SustainPine v3.0 3762
AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 7.558e-26
Complete
sp_v3.0_unigene6191 SustainPine v3.0 3544
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.58596e-41
Complete
sp_v3.0_unigene6901 SustainPine v3.0 3756
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 8.507e-28
Complete
sp_v3.0_unigene7138 SustainPine v3.0 1467
AutoFact: Gulonolactone oxidase, putative n=1 Tax=Ricinus communis RepID=B9RQW4_RICCO 0.0
FL-Next: sp=Cytokinin dehydrogenase 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytokinin oxidase 7.82065e-42
C-terminus
sp_v3.0_unigene7843 SustainPine v3.0 3324
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.39801e-41
Putative C-terminus
sp_v3.0_unigene10103 SustainPine v3.0 623
AutoFact: cytokinin oxidase [Dendrobium hybrid cultivar] emb|CAC17753.1| cytokinin oxidase [Dendrobium hybrid cultivar] 2.0e-16
FL-Next: sp=Cytokinin dehydrogenase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytokinin oxidase 3.335e-28
Putative C-terminus
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene14527 SustainPine v3.0 918
AutoFact: Cytokinin dehydrogenase 3 n=2 Tax=Oryza sativa RepID=CKX3_ORYSJ 0.0
FL-Next: sp=Cytokinin dehydrogenase 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Cytokinin oxidase 3.267e-38
Internal
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene52829 SustainPine v3.0 356
AutoFact: Serine-threonine protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GBK8_CUCME 3.0e-33
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Fasciated Ear2 protein 1.244e-17
Internal
sp_v3.0_unigene57126 SustainPine v3.0 414
AutoFact: RuvB-like DNA helicase n=4 Tax=Pleosporineae RepID=B2W669_PYRTR 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rvb1-like protein 1.905e-08
Internal
sp_v3.0_unigene60427 SustainPine v3.0 459
AutoFact: Cytokinin oxidase n=1 Tax=Populus trichocarpa RepID=B9IHX6_POPTR 0.0
FL-Next: sp=Cytokinin dehydrogenase 9; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Cytokinin oxidase 3.54e-38
Internal
sp_v3.0_unigene61736 SustainPine v3.0 174
AutoFact: DNA helicase, putative n=4 Tax=rosids RepID=B9SCX8_RICCO 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Rvb1-like protein 1.571e-08
Internal
sp_v3.0_unigene63269 SustainPine v3.0 244
AutoFact: auxin response factor 10 [Arabidopsis thaliana] sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10 gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana] gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana] gb|AAD20 1.0e-32
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 1.4013e-45
Internal
sp_v3.0_unigene64801 SustainPine v3.0 165
AutoFact: cytokinin oxidase/dehydrogenase 6 [Arabidopsis thaliana] sp|Q9LY71.2|CKX6_ARATH RecName: Full=Cytokinin dehydrogenase 6; AltName: Full=Cytokinin oxidase 6; Short=AtCKX6; Short=AtCKX7; Short=CKO6; Flags: Precursor gb|AEE80482.1| cytokinin oxidase/dehydroge 2.0e-20
FL-Next: sp=Cytokinin dehydrogenase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytokinin oxidase 3.54e-38
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain