Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: blue light signaling pathway

Term: GO:0009785  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1568 SustainPine v3.0 3619
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene4689 SustainPine v3.0 1612
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, Mutator sub-class, expressed 1.496e-12
C-terminus
sp_v3.0_unigene5040 SustainPine v3.0 912
AutoFact: DNA-binding transcription factor blind 1 n=1 Tax=Gossypium hirsutum RepID=E7D5Q3_GOSHI 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.382e-24
Internal
sp_v3.0_unigene6191 SustainPine v3.0 3544
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.58596e-41
Complete
sp_v3.0_unigene6548 SustainPine v3.0 1430
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photoreceptor-interacting protein-like 9.971e-16
C-terminus
sp_v3.0_unigene6901 SustainPine v3.0 3756
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 8.507e-28
Complete
sp_v3.0_unigene7224 SustainPine v3.0 1328
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein Mutator sub-class 1.27e-13
Putative C-terminus
sp_v3.0_unigene7843 SustainPine v3.0 3324
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.39801e-41
Putative C-terminus
sp_v3.0_unigene9652 SustainPine v3.0 191
AutoFact: non-phototropic hypocotyl 3 [Arabidopsis thaliana] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene9873 SustainPine v3.0 1217
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photoreceptor-interacting protein-like 6.474e-13
Putative C-terminus
sp_v3.0_unigene11430 SustainPine v3.0 828
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 5.0e-21
FL-Next: Isoform 2 of Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 0.0
Sma3: Auxin response factor 2 1.716e-07
Internal
sp_v3.0_unigene12324 SustainPine v3.0 4347
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene14576 SustainPine v3.0 1161
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, Mutator sub-class, expressed 4.695e-11
N-terminus
sp_v3.0_unigene23920 SustainPine v3.0 475
AutoFact: putative transcription factor [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=R2r3-myb transcription factor, putative; Ricinus communis (Castor bean). 0.0
Sma3: R2r3-myb transcription factor, putative 6.333e-15
Complete
sp_v3.0_unigene23988 SustainPine v3.0 2896
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene41217 SustainPine v3.0 3576
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene43037 SustainPine v3.0 1079
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9T4I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Root phototropism protein, putative 2.225e-13
Internal
sp_v3.0_unigene43059 SustainPine v3.0 349
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q66GP0.2|Y5738_ARATH RecName: Full=BTB/POZ domain-containing protein At5g67385 gb|AED98336.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Root phototropism protein, putative 2.565e-13
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain