Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase IV complex

Term: GO:0000418  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1535 SustainPine v3.0 4578
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV38_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene16572 SustainPine v3.0 529
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 1.0e-26
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene46411 SustainPine v3.0 210
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.0e-31
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Podocarpus totara. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 9.572e-33
Internal
sp_v3.0_unigene48468 SustainPine v3.0 565
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 7.331e-36
Putative Complete
sp_v3.0_unigene62960 SustainPine v3.0 228
AutoFact: DNA-directed RNA polymerase D subunit 2a n=3 Tax=Arabidopsis RepID=RPD2A_ARATH 2.0e-13
FL-Next: sp=DNA-directed RNA polymerase D subunit 2a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.708e-12
Internal
sp_v3.0_unigene97456 SustainPine v3.0 588
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 5.0e-25
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene101651 SustainPine v3.0 479
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 6.085e-25
C-terminus
sp_v3.0_unigene105032 SustainPine v3.0 422
AutoFact: DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GM06_POPTR 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.94e-11
Internal
sp_v3.0_unigene107823 SustainPine v3.0 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Sma3: DNA-directed RNA polymerase 1.371e-20
Internal
sp_v3.0_unigene112810 SustainPine v3.0 331
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 4.0e-27
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Sma3: DNA-directed RNA polymerase 1.476e-08
Internal
sp_v3.0_unigene114970 SustainPine v3.0 626
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene193150 SustainPine v3.0 607
AutoFact: DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S2W9_TRIAD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain