Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of translation

Term: GO:0006417  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1503 SustainPine v3.0 1488
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene3973 SustainPine v3.0 1599
AutoFact: eukaryotic translation initiation factor 4E [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4E 1.485e-22
Complete
sp_v3.0_unigene4067 SustainPine v3.0 3499
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A-1 4.16e-08
Complete
sp_v3.0_unigene6267 SustainPine v3.0 1782
AutoFact: F-box protein 7 n=2 Tax=Arabidopsis RepID=SKI32_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23664 SustainPine v3.0 3049
AutoFact: RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene26080 SustainPine v3.0 523
AutoFact: Eukaryotic translation initiation factor 1b n=36 Tax=Euteleostomi RepID=EIF1B_HUMAN 2.0e-39
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 6.174e-15
Complete
sp_v3.0_unigene28523 SustainPine v3.0 622
AutoFact: Translation initiation protein n=2 Tax=Chlamydomonadales RepID=A8IP53_CHLRE 1.0e-24
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 2.599e-15
Putative Complete
sp_v3.0_unigene31931 SustainPine v3.0 559
AutoFact: Eukaryotic translation initiation factor 1 n=1 Tax=Postia placenta Mad-698-R RepID=B8PG59_POSPM 2.0e-32
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 2.825e-15
Complete
sp_v3.0_unigene44626 SustainPine v3.0 294
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 1.0e-34
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.483e-12
Internal
sp_v3.0_unigene48227 SustainPine v3.0 225
AutoFact: CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana] dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36264.1| unknown protein [Arabidopsis thaliana] gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis 1.0e-21
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Sma3: Protein CHLOROPLAST RNA SPLICING 1 7.691e-13
Internal
sp_v3.0_unigene49792 SustainPine v3.0 652
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.681e-12
Putative C-terminus
sp_v3.0_unigene51833 SustainPine v3.0 236
AutoFact: Unassigned protein
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene65842 SustainPine v3.0 210
AutoFact: Translation initiation factor nCBP n=2 Tax=Triticeae RepID=A3RCV9_WHEAT 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4E type 3 2.399e-09
Internal
sp_v3.0_unigene65921 SustainPine v3.0 267
AutoFact: eukaryotic translation initiation factor iso4E [Lactuca sativa] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4E-2 6.874e-21
Internal
sp_v3.0_unigene67438 SustainPine v3.0 279
AutoFact: 1-aminocyclopropane-1-carboxylate synthase 1 (Fragment) n=1 Tax=Pinus sylvestris RepID=Q56VN2_PINSY 1.0e-27
FL-Next: tr=ACC synthase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: 1-aminocyclopropane-1-carboxylate synthase 0.0
Internal
sp_v3.0_unigene71842 SustainPine v3.0 348
AutoFact: 1-aminocyclopropane-1-carboxylate synthase 1 (Fragment) n=1 Tax=Pinus sylvestris RepID=Q56VN2_PINSY 0.0
FL-Next: tr=ACC synthase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: 1-aminocyclopropane-1-carboxylate synthase 0.0
Internal
sp_v3.0_unigene75147 SustainPine v3.0 413
AutoFact: Protein translation factor SUI1 n=2 Tax=Pleosporineae RepID=B2W8D4_PYRTR 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein translation factor SUI1 homolog 5.195e-15
Putative Complete
sp_v3.0_unigene75765 SustainPine v3.0 417
AutoFact: ACC synthase n=3 Tax=Pinaceae RepID=A2IA39_9CONI 0.0
FL-Next: tr=ACC synthase; Picea engelmannii x Picea glauca. 0.0
Sma3: 1-aminocyclopropane-1-carboxylate synthase 0.0
Internal
sp_v3.0_unigene81227 SustainPine v3.0 242
AutoFact: ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] gb|EAU89171.1| ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 6 9.382e-08
Putative C-terminus
sp_v3.0_unigene103109 SustainPine v3.0 542
AutoFact: Unassigned protein
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain