Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of translation

Term: GO:0006417  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene120542 SustainPine v3.0 389
• AutoFact: 1-aminocyclopropane-1-carboxylate synthase 1 (Fragment) n=1 Tax=Pinus sylvestris RepID=Q56VN2_PINSY 0.0
• FL-Next: tr=ACC synthase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: 1-aminocyclopropane-1-carboxylate synthase 0.0
Internal
sp_v3.0_unigene129441 SustainPine v3.0 393
• AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130124 SustainPine v3.0 537
• AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] 2.99878e-43
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
• Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.483e-12
Internal
sp_v3.0_unigene136190 SustainPine v3.0 226
• AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] 2.0e-23
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.445e-12
Internal
sp_v3.0_unigene143512 SustainPine v3.0 492
• AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 1.0e-22
• FL-Next: sp=Protein translation factor SUI1 homolog; Sporobolus stapfianus (Ressurection grass). 0.0
• Sma3: Protein translation factor SUI1 homolog 1.915e-15
C-terminus
sp_v3.0_unigene143647 SustainPine v3.0 897
• AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 8.99634e-43
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 8.28e-15
Putative Complete
sp_v3.0_unigene144717 SustainPine v3.0 286
• AutoFact: eukaryotic translation initiation factor 4E-1 [Zea mays] sp|O81481.1|IF4E1_MAIZE RecName: Full=Eukaryotic translation initiation factor 4E-1; Short=eIF-4E-1; Short=eIF4E-1; AltName: Full=eIF-4F 25 kDa subunit; AltName: Full=eIF-4F p26 subunit; AltName: Fu 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 4E-2 5.163e-18
Internal
sp_v3.0_unigene144935 SustainPine v3.0 271
• AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 2.0e-08
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 1.445e-15
Putative N-terminus
sp_v3.0_unigene148899 SustainPine v3.0 284
• AutoFact: CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana] dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36264.1| unknown protein [Arabidopsis thaliana] gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis 4.0e-29
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene151642 SustainPine v3.0 369
• AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein translation factor SUI1 homolog 4.582e-15
Putative Complete
sp_v3.0_unigene153830 SustainPine v3.0 590
• AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 8.0e-35
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 8.28e-15
Complete
sp_v3.0_unigene157973 SustainPine v3.0 266
• AutoFact: 1-aminocyclopropane-1-carboxylate synthase 1 (Fragment) n=1 Tax=Pinus sylvestris RepID=Q56VN2_PINSY 7.0e-32
• FL-Next: tr=ACC synthase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: 1-aminocyclopropane-1-carboxylate synthase 0.0
Internal
sp_v3.0_unigene159369 SustainPine v3.0 136
• AutoFact: putative RNA helicase (ISS) [Ostreococcus tauri] emb|CAL53470.1| putative RNA helicase (ISS) [Ostreococcus tauri] 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 6 1.165e-08
Internal
sp_v3.0_unigene162634 SustainPine v3.0 392
• AutoFact: putative translation factor [Pinus pinaster] gb|ABK20970.1| unknown [Picea sitchensis] gb|ABK22220.1| unknown [Picea sitchensis] gb|ABK23355.1| unknown [Picea sitchensis] gb|ABK26752.1| unknown [Picea sitchensis] gb|ABR16497.1| unknown [Picea sitchensis] 1.0e-25
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 2.189e-15
N-terminus
sp_v3.0_unigene190331 SustainPine v3.0 453
• AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 2.0e-26
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 8.15e-15
Complete
sp_v3.0_unigene190639 SustainPine v3.0 365
• AutoFact: Eukaryotic initiation factor 4A-III n=1 Tax=Caligus clemensi RepID=C1C237_9MAXI 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.226e-09
N-terminus
sp_v3.0_unigene192739 SustainPine v3.0 496
• AutoFact: Eukaryotic translation initiation factor 1b, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MWG8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein translation factor SUI1 homolog 4.024e-15
Complete
sp_v3.0_unigene205591 SustainPine v3.0 490
• AutoFact: Putative eukaryotic translation initiation factor SUI1 n=1 Tax=Catharanthus roseus RepID=F2VQM9_CATRO 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein translation factor SUI1 homolog 1.788e-15
Putative Complete
sp_v3.0_unigene209448 SustainPine v3.0 944
• AutoFact: F-box protein 7 [Arabidopsis thaliana] sp|Q9XI00.1|SKI32_ARATH RecName: Full=F-box protein 7; AltName: Full=SKP1-interacting partner 32 gb|AAD41431.1|AC007727_20 Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from 0.0
• FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain