Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene67494 SustainPine v3.0 324
AutoFact: Coronatine-insensitive protein 1 n=4 Tax=Andropogoneae RepID=B6SW30_MAIZE 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.289e-27
Internal
sp_v3.0_unigene68123 SustainPine v3.0 182
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 5.0e-22
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Sma3: TRANSPORT INHIBITOR RESPONSE 1 protein, putative 5.595e-08
Internal
sp_v3.0_unigene75418 SustainPine v3.0 337
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 2.74e-23
N-terminus
sp_v3.0_unigene127325 SustainPine v3.0 1791
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 7.744e-20
C-terminus
sp_v3.0_unigene128847 SustainPine v3.0 653
AutoFact: Coronatine-insensitive 1 n=1 Tax=Solanum lycopersicum RepID=Q6TDU2_SOLLC 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.985e-15
N-terminus
sp_v3.0_unigene133771 SustainPine v3.0 551
AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 1.107e-16
Putative Complete
sp_v3.0_unigene143239 SustainPine v3.0 751
AutoFact: Protein SGT1 homolog B n=4 Tax=Brassicaceae RepID=SGT1B_ARATH 2.0e-35
FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SGT1-2 1.521e-12
Complete
sp_v3.0_unigene144802 SustainPine v3.0 640
AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 9.115e-17
C-terminus
sp_v3.0_unigene150656 SustainPine v3.0 266
AutoFact: RING-box protein 1 n=5 Tax=leotiomyceta RepID=A7E405_SCLS1 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 8.757e-17
C-terminus
sp_v3.0_unigene152297 SustainPine v3.0 513
AutoFact: Phosphatase-like protein, putative n=2 Tax=Trypanosoma brucei RepID=C9ZIN8_TRYB9 9.0e-33
FL-Next: sp=Protein SGT1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SGT1-like protein 1.063e-10
C-terminus
sp_v3.0_unigene154016 SustainPine v3.0 335
AutoFact: PREDICTED: RING-box protein 1-like n=1 Tax=Macaca mulatta RepID=UPI0001D53DBD 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 9.865e-17
C-terminus
sp_v3.0_unigene159783 SustainPine v3.0 354
AutoFact: ZEITLUPE [Mesembryanthemum crystallinum] 5.0e-20
FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene190379 SustainPine v3.0 338
AutoFact: ring finger [Aedes aegypti] gb|ABF18349.1| SCF ubiquitin ligase Rbx1 component [Aedes aegypti] gb|EAT43885.1| ring finger [Aedes aegypti] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 1.026e-16
N-terminus
sp_v3.0_unigene191741 SustainPine v3.0 346
AutoFact: RING-box protein 1 n=5 Tax=leotiomyceta RepID=A7E405_SCLS1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 2.48e-16
C-terminus
sp_v3.0_unigene192427 SustainPine v3.0 382
AutoFact: Phosphatase-like protein n=1 Tax=Leishmania braziliensis MHOM/BR/75/M2904 RepID=E9AIL2_LEIBR 5.0e-21
FL-Next: sp=Protein SGT1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SGT1 1.187e-14
C-terminus
sp_v3.0_unigene208411 SustainPine v3.0 555
AutoFact: Coronatine-insensitive 1 n=1 Tax=Solanum lycopersicum RepID=Q6TDU2_SOLLC 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.985e-15
N-terminus
sp_v3.0_unigene209129 SustainPine v3.0 338
AutoFact: Coronatine-insensitive 1 n=1 Tax=Hevea brasiliensis RepID=A8HSC8_HEVBR 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 1.979e-14
Internal
sp_v3.0_unigene209501 SustainPine v3.0 764
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SGT1-like protein 4.588e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain