Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1435 SustainPine v3.0 3375
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EIN3-binding F-box protein 1 2.315e-13
Complete
sp_v3.0_unigene2080 SustainPine v3.0 3187
AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EIN3-binding F-box protein 2 3.622e-09
Complete
sp_v3.0_unigene4210 SustainPine v3.0 2697
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene6047 SustainPine v3.0 2671
AutoFact: coronatine-insensitive 1 [Solanum lycopersicum] gb|AAR82926.1| coronatine-insensitive 1 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.473e-18
Complete
sp_v3.0_unigene6491 SustainPine v3.0 2568
AutoFact: coronatine-insensitive 1 [Solanum lycopersicum] gb|AAR82926.1| coronatine-insensitive 1 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 3.965e-18
Complete
sp_v3.0_unigene7196 SustainPine v3.0 3207
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.369e-20
Complete
sp_v3.0_unigene7887 SustainPine v3.0 2289
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Putative Complete
sp_v3.0_unigene8169 SustainPine v3.0 1953
AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_253, whole genome shotgun sequence 4.505e-15
Complete
sp_v3.0_unigene8883 SustainPine v3.0 2186
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 0.0
FL-Next: sp=Protein SGT1 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SGT1-like protein 6.915e-26
Complete
sp_v3.0_unigene14759 SustainPine v3.0 3337
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene14912 SustainPine v3.0 3206
AutoFact: coronatine-insensitive 1 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.473e-18
Complete
sp_v3.0_unigene15765 SustainPine v3.0 1064
AutoFact: coronatine-insensitive 1 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 3.401e-14
N-terminus
sp_v3.0_unigene17372 SustainPine v3.0 775
AutoFact: [R] COG5091 Suppressor of G2 allele of skp1 and related proteins 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SGT1 1.406e-14
Putative Complete
sp_v3.0_unigene17611 SustainPine v3.0 1020
AutoFact: putative ring-box protein [Oryza sativa Japonica Group] dbj|BAD44884.1| putative ring-box protein [Oryza sativa Japonica Group] gb|EEE53718.1| hypothetical protein OsJ_00057 [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 2.48e-16
Complete
sp_v3.0_unigene20851 SustainPine v3.0 3000
AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene21828 SustainPine v3.0 701
AutoFact: Coronatine-insensitive 1 n=1 Tax=Hevea brasiliensis RepID=A8HSC8_HEVBR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 3.107e-14
Putative N-terminus
sp_v3.0_unigene27474 SustainPine v3.0 805
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TIR1-like protein 7.619e-20
C-terminus
sp_v3.0_unigene34842 SustainPine v3.0 970
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TIR1-like protein 7.619e-20
C-terminus
sp_v3.0_unigene37640 SustainPine v3.0 1490
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene58692 SustainPine v3.0 324
AutoFact: PREDICTED: RING-box protein 1-like isoform 2 n=2 Tax=Hominidae RepID=UPI0001D61988 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 9.865e-17
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain