Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Putative gag-pol polyprotein

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1431 SustainPine v3.0 7160
AutoFact: gag-pol polyprotein [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 2.535e-09
Complete
sp_v3.0_unigene45183 SustainPine v3.0 228
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 6.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative gag-pol polyprotein 2.693e-06
C-terminus
sp_v3.0_unigene51573 SustainPine v3.0 309
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative gag-pol polyprotein 3.176e-06
C-terminus
sp_v3.0_unigene61575 SustainPine v3.0 301
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 4.499e-10
Internal
sp_v3.0_unigene62355 SustainPine v3.0 193
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative gag-pol polyprotein 3.176e-06
Putative C-terminus
sp_v3.0_unigene70810 SustainPine v3.0 232
AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Bouteloua hirsuta subsp. pectinata RepID=D2Y6R6_9POAL 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 1.685e-09
Putative Complete
sp_v3.0_unigene96660 SustainPine v3.0 542
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=7 Tax=Poaceae RepID=Q10IG2_ORYSJ 6.0e-37
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative gag-pol polyprotein 6.806e-12
Internal
sp_v3.0_unigene114386 SustainPine v3.0 452
AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 2.0e-38
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Putative gag-pol polyprotein 6.377e-15
Putative C-terminus
sp_v3.0_unigene159993 SustainPine v3.0 499
AutoFact: rve domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 1.2e-08
Internal
sp_v3.0_unigene163640 SustainPine v3.0 208
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUP9_ORYSJ 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 4.733e-09
Internal
sp_v3.0_unigene165406 SustainPine v3.0 470
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 1.536e-13
Internal
sp_v3.0_unigene165515 SustainPine v3.0 489
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 4.592e-07
N-terminus
sp_v3.0_unigene203647 SustainPine v3.0 453
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative gag-pol polyprotein 1.584e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain