Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryonic pattern specification

Term: GO:0009880  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene138297 SustainPine v3.0 510
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RG14_RICCO 5.0e-22
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Putative C-terminus
sp_v3.0_unigene139964 SustainPine v3.0 394
AutoFact: Frizzy panicle n=11 Tax=Oryza RepID=Q8H3Q1_ORYSJ 3.0e-25
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene142567 SustainPine v3.0 362
AutoFact: Ethylene-responsive transcription factor 4 n=4 Tax=Nicotiana RepID=ERF4_NICSY 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.285e-28
Putative N-terminus
sp_v3.0_unigene148381 SustainPine v3.0 286
AutoFact: Auxin-responsive protein IAA13 n=7 Tax=Brassicaceae RepID=IAA13_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin-responsive protein IAA13, putative 2.399e-09
Putative C-terminus
sp_v3.0_unigene168170 SustainPine v3.0 132
AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.614e-08
Internal
sp_v3.0_unigene185136 SustainPine v3.0 360
AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative guanine nucleotide-exchange protein GEP2 1.119e-11
Internal
sp_v3.0_unigene194972 SustainPine v3.0 390
AutoFact: Auxin-induced protein 4 n=1 Tax=Pinus taeda RepID=Q7XYT3_PINTA 9.0e-23
FL-Next: tr=Auxin-induced protein 4; Pinus taeda (Loblolly pine). 0.0
Sma3: Aux/IAA protein 5.893e-30
C-terminus
sp_v3.0_unigene209302 SustainPine v3.0 670
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.114e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain