Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryonic pattern specification

Term: GO:0009880  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene99708 SustainPine v3.0 1113
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene100339 SustainPine v3.0 442
AutoFact: Class III homeodomain-leucine zipper protein C3HDZ2 (Fragment) n=1 Tax=Psilotum nudum RepID=Q20BL3_PSINU 2.0e-39
FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
Sma3: Class III homeodomain-leucine zipper 2.226e-30
Internal
sp_v3.0_unigene101156 SustainPine v3.0 887
AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.881e-33
Internal
sp_v3.0_unigene102964 SustainPine v3.0 465
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 2.796e-08
Internal
sp_v3.0_unigene103914 SustainPine v3.0 205
AutoFact: putative pattern formation protein GNOM [Oryza sativa Japonica Group] dbj|BAD16386.1| putative pattern formation protein GNOM [Oryza sativa Japonica Group] 6.0e-19
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 2.693e-08
Internal
sp_v3.0_unigene104696 SustainPine v3.0 581
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 8.714e-12
Internal
sp_v3.0_unigene105016 SustainPine v3.0 507
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 6.0e-31
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
Sma3: Dicer-like 4 1.165e-08
N-terminus
sp_v3.0_unigene105331 SustainPine v3.0 294
AutoFact: U3 small nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9S245_RICCO 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107908 SustainPine v3.0 588
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HHX6_POPTR 4.00001e-40
FL-Next: sp=Endoribonuclease Dicer homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dicer-like protein 3.417e-20
N-terminus
sp_v3.0_unigene108820 SustainPine v3.0 486
AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene110535 SustainPine v3.0 193
AutoFact: Homeodomain transcription factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GB81_CUCME 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein WUSCHEL 8.858e-15
Internal
sp_v3.0_unigene110972 SustainPine v3.0 194
AutoFact: Unassigned protein
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene114539 SustainPine v3.0 237
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 1.0e-29
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 3.113e-08
Internal
sp_v3.0_unigene114924 SustainPine v3.0 373
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group] gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.009e-08
Internal
sp_v3.0_unigene117539 SustainPine v3.0 326
AutoFact: Ethylene-responsive transcription factor, putative n=1 Tax=Ricinus communis RepID=B9T1Y1_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.516e-38
N-terminus
sp_v3.0_unigene122547 SustainPine v3.0 351
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 3.0e-34
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Dicer-like protein 7.796e-10
Internal
sp_v3.0_unigene122919 SustainPine v3.0 546
AutoFact: putative auxin-induced protein, IAA12 [Arabidopsis thaliana] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130756 SustainPine v3.0 314
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 9.0e-34
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 3.168e-08
Internal
sp_v3.0_unigene131076 SustainPine v3.0 202
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 1.0e-16
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137618 SustainPine v3.0 199
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 3.0e-12
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 2.693e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain