Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: transcription cofactor activity

Term: GO:0003712  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene149165 SustainPine v3.0 257
AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase) 1.0e-17
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.952e-07
Putative C-terminus
sp_v3.0_unigene149659 SustainPine v3.0 279
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 7.5e-07
N-terminus
sp_v3.0_unigene161600 SustainPine v3.0 263
AutoFact: [L] COG2801 Transposase and inactivated derivatives 6.0e-14
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene162810 SustainPine v3.0 328
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein P0017D10.13; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164303 SustainPine v3.0 322
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 5.757e-07
N-terminus
sp_v3.0_unigene196430 SustainPine v3.0 401
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.00386e-43
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: p300/CBP acetyltransferase-related protein 8.619e-09
C-terminus
sp_v3.0_unigene208384 SustainPine v3.0 544
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 15a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain