Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr13 scaffold_120, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1249 SustainPine v3.0 2438
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 1.488e-14
Putative Complete
sp_v3.0_unigene10654 SustainPine v3.0 1375
AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein n=2 Tax=Arabidopsis RepID=Q9LFS3_ARATH 0.0
FL-Next: sp=Steroid 5-alpha-reductase DET2; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 3.543e-10
Complete
sp_v3.0_unigene11882 SustainPine v3.0 587
AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gb|AAN64521.1| At5g16010/F1N13_150 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 1.043e-09
Putative C-terminus
sp_v3.0_unigene69522 SustainPine v3.0 122
AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gb|AAN64521.1| At5g16010/F1N13_150 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 8.933e-08
Internal
sp_v3.0_unigene71659 SustainPine v3.0 315
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 4.505e-10
N-terminus
sp_v3.0_unigene140406 SustainPine v3.0 1203
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 3.854e-07
Putative Complete
sp_v3.0_unigene149659 SustainPine v3.0 279
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 7.5e-07
N-terminus
sp_v3.0_unigene164303 SustainPine v3.0 322
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 5.757e-07
N-terminus
sp_v3.0_unigene187758 SustainPine v3.0 1249
AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein n=2 Tax=Arabidopsis RepID=Q9LFS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 3.543e-10
Complete
sp_v3.0_unigene194808 SustainPine v3.0 446
AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gb|AAN64521.1| At5g16010/F1N13_150 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 1.319e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain