Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, Ty3-gypsy subclass

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1225 SustainPine v3.0 2360
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.554e-35
Putative Complete
sp_v3.0_unigene11811 SustainPine v3.0 1356
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene25063 SustainPine v3.0 308
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 1.0e-20
• FL-Next: tr=OSJNBa0074B10.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.656e-29
Internal
sp_v3.0_unigene26875 SustainPine v3.0 277
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.13e-37
Putative Complete
sp_v3.0_unigene27595 SustainPine v3.0 910
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.211e-19
Complete
sp_v3.0_unigene39985 SustainPine v3.0 326
• AutoFact: Putative polyprotein (Fragment) n=1 Tax=Cicer arietinum RepID=Q949K9_CICAR 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.866e-10
Putative Complete
sp_v3.0_unigene40544 SustainPine v3.0 2340
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene40651 SustainPine v3.0 1097
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75KD0_ORYSJ 2.0e-22
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.817e-38
Putative N-terminus
sp_v3.0_unigene41592 SustainPine v3.0 235
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 7.0e-23
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.965e-37
N-terminus
sp_v3.0_unigene42224 SustainPine v3.0 2781
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene43136 SustainPine v3.0 776
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 6.0e-26
• FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.085e-30
Internal
sp_v3.0_unigene43759 SustainPine v3.0 1857
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene44320 SustainPine v3.0 555
• AutoFact: putative retrotransposon polyprotein [Ipomoea batatas] 8.99634e-43
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.617e-18
N-terminus
sp_v3.0_unigene44329 SustainPine v3.0 525
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 4.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.47e-11
Putative Complete
sp_v3.0_unigene44385 SustainPine v3.0 434
• AutoFact: RVT_1 domain containing protein 5.0e-09
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative N-terminus
sp_v3.0_unigene44671 SustainPine v3.0 406
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 7.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.555e-30
N-terminus
sp_v3.0_unigene45798 SustainPine v3.0 267
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.641e-31
Internal
sp_v3.0_unigene45930 SustainPine v3.0 1032
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.156e-11
Putative Complete
sp_v3.0_unigene46733 SustainPine v3.0 600
• AutoFact: RVT_1 domain containing protein 3.0e-19
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene51662 SustainPine v3.0 447
• AutoFact: rve domain containing protein 3.0e-13
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.27518e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain