|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene56794
|
SustainPine v3.0
|
414
|
|
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA
|
1.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.965e-09
|
|
Putative Complete
|
|
sp_v3.0_unigene56835
|
SustainPine v3.0
|
297
|
|
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558
|
8.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
9.142e-29
|
|
Internal
|
|
sp_v3.0_unigene57010
|
SustainPine v3.0
|
294
|
|
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.902e-10
|
|
N-terminus
|
|
sp_v3.0_unigene57152
|
SustainPine v3.0
|
349
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR
|
3.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.233e-10
|
|
Internal
|
|
sp_v3.0_unigene57529
|
SustainPine v3.0
|
478
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XCD6_ORYSJ
|
1.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.085e-24
|
|
Putative Complete
|
|
sp_v3.0_unigene57649
|
SustainPine v3.0
|
370
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE
|
6.0e-26
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative N-terminus
|
|
sp_v3.0_unigene57763
|
SustainPine v3.0
|
201
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q10HE7_ORYSJ
|
2.0e-16
|
|
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.69e-38
|
|
Internal
|
|
sp_v3.0_unigene57982
|
SustainPine v3.0
|
338
|
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
2.0e-22
|
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.209e-11
|
|
Internal
|
|
sp_v3.0_unigene58015
|
SustainPine v3.0
|
470
|
|
• AutoFact: RVT_1 domain containing protein
|
2.0e-19
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.108e-07
|
|
Putative Complete
|
|
sp_v3.0_unigene58022
|
SustainPine v3.0
|
402
|
|
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein orf215; Nicotiana tabacum (Common tobacco). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
9.156e-30
|
|
C-terminus
|
|
sp_v3.0_unigene58298
|
SustainPine v3.0
|
222
|
|
• AutoFact: [L] COG2801 Transposase and inactivated derivatives
|
4.0e-14
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.012e-15
|
|
Putative Complete
|
|
sp_v3.0_unigene58346
|
SustainPine v3.0
|
310
|
|
• AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum]
|
8.0e-30
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.75e-25
|
|
C-terminus
|
|
sp_v3.0_unigene58834
|
SustainPine v3.0
|
324
|
|
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ
|
1.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.105e-23
|
|
Putative Complete
|
|
sp_v3.0_unigene59064
|
SustainPine v3.0
|
436
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA
|
4.99983e-42
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene59359
|
SustainPine v3.0
|
224
|
|
• AutoFact: Polyprotein, putative (Fragment) n=1 Tax=Solanum tuberosum RepID=Q0KIJ4_SOLTU
|
2.0e-18
|
|
• FL-Next: tr=OSJNBa0014F04.5 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene59545
|
SustainPine v3.0
|
284
|
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
6.0e-15
|
|
• FL-Next: tr=Putative 22 kDa kafirin cluster; Ty3-Gypsy type; Oryza sativa (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.851e-25
|
|
Internal
|
|
sp_v3.0_unigene59603
|
SustainPine v3.0
|
316
|
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
4.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.142e-25
|
|
Putative Complete
|
|
sp_v3.0_unigene59998
|
SustainPine v3.0
|
425
|
|
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU
|
6.99949e-42
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene60076
|
SustainPine v3.0
|
274
|
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
8.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
3.733e-30
|
|
Internal
|
|
sp_v3.0_unigene60372
|
SustainPine v3.0
|
363
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ
|
2.0e-28
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
