|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene161420
|
SustainPine v3.0
|
503
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=7 Tax=Poaceae RepID=Q10IG2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.788e-32
|
|
Putative Complete
|
|
sp_v3.0_unigene161749
|
SustainPine v3.0
|
373
|
|
• AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ
|
5.0e-33
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
7.999e-26
|
|
Putative Complete
|
|
sp_v3.0_unigene161753
|
SustainPine v3.0
|
356
|
|
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE
|
2.0e-38
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.127e-20
|
|
C-terminus
|
|
sp_v3.0_unigene161754
|
SustainPine v3.0
|
413
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=3 Tax=Oryza sativa RepID=Q10A24_ORYSJ
|
8.0e-22
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene161764
|
SustainPine v3.0
|
438
|
|
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558
|
7.0e-35
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.151e-18
|
|
C-terminus
|
|
sp_v3.0_unigene161820
|
SustainPine v3.0
|
253
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ
|
2.0e-22
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
7.698e-13
|
|
Putative C-terminus
|
|
sp_v3.0_unigene161870
|
SustainPine v3.0
|
406
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ
|
2.0e-38
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene161921
|
SustainPine v3.0
|
282
|
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
2.0e-22
|
|
• FL-Next: tr=Putative 22 kDa kafirin cluster; Ty3-Gypsy type; Oryza sativa (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene161948
|
SustainPine v3.0
|
504
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE
|
1.0e-32
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
3.825e-28
|
|
N-terminus
|
|
sp_v3.0_unigene162476
|
SustainPine v3.0
|
332
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ
|
7.0e-29
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.895e-32
|
|
N-terminus
|
|
sp_v3.0_unigene162529
|
SustainPine v3.0
|
477
|
|
• AutoFact: F5K24.7 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG1_ARATH
|
3.0e-33
|
|
• FL-Next: tr=F5K24.7 protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.215e-38
|
|
Internal
|
|
sp_v3.0_unigene162611
|
SustainPine v3.0
|
387
|
|
• AutoFact: rve domain containing protein
|
9.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.839e-16
|
|
Internal
|
|
sp_v3.0_unigene162832
|
SustainPine v3.0
|
456
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL
|
1.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene162877
|
SustainPine v3.0
|
458
|
|
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA
|
7.0e-24
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
8.112e-07
|
|
Putative C-terminus
|
|
sp_v3.0_unigene162930
|
SustainPine v3.0
|
371
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ
|
6.0e-22
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.412e-08
|
|
Internal
|
|
sp_v3.0_unigene163066
|
SustainPine v3.0
|
259
|
|
• AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase)
|
3.0e-17
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene163374
|
SustainPine v3.0
|
416
|
|
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE
|
2.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene163680
|
SustainPine v3.0
|
451
|
|
• AutoFact: OSJNBa0059H15.7 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XXI2_ORYSJ
|
6.0e-30
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
3.451e-08
|
|
Putative Complete
|
|
sp_v3.0_unigene163861
|
SustainPine v3.0
|
410
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53M39_ORYSJ
|
5.0e-29
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
6.7e-13
|
|
Putative C-terminus
|
|
sp_v3.0_unigene164458
|
SustainPine v3.0
|
312
|
|
• AutoFact: rve domain containing protein
|
8.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.261e-40
|
|
Putative Complete
|
