Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosystem II assembly

Term: GO:0010207  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75637 SustainPine v3.0 187
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 5.727e-31
Internal
sp_v3.0_unigene77452 SustainPine v3.0 317
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 5.659e-34
Internal
sp_v3.0_unigene78249 SustainPine v3.0 169
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 5.781e-10
C-terminus
sp_v3.0_unigene78965 SustainPine v3.0 426
• AutoFact: pfam01535, PPR, PPR repeat 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.301e-10
Internal
sp_v3.0_unigene81128 SustainPine v3.0 177
• AutoFact: oxygen-evolving enhancer protein 1 [Oryza sativa Indica Group] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 33 kDa subunit 2.385e-33
Misassembled
sp_v3.0_unigene102595 SustainPine v3.0 586
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.567e-14
Internal
sp_v3.0_unigene109192 SustainPine v3.0 564
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 4.289e-17
Internal
sp_v3.0_unigene109445 SustainPine v3.0 428
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.29e-13
Internal
sp_v3.0_unigene112298 SustainPine v3.0 608
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 2.078e-08
Internal
sp_v3.0_unigene115897 SustainPine v3.0 243
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.048e-09
Internal
sp_v3.0_unigene116458 SustainPine v3.0 377
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene116769 SustainPine v3.0 264
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.136e-06
Internal
sp_v3.0_unigene120694 SustainPine v3.0 368
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 4.444e-12
Internal
sp_v3.0_unigene122583 SustainPine v3.0 401
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.637e-15
N-terminus
sp_v3.0_unigene129596 SustainPine v3.0 348
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.217e-11
C-terminus
sp_v3.0_unigene129643 SustainPine v3.0 378
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 6.154e-10
C-terminus
sp_v3.0_unigene130812 SustainPine v3.0 232
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132780 SustainPine v3.0 384
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.474e-11
Internal
sp_v3.0_unigene135655 SustainPine v3.0 480
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40410, mitochondrial; Flags: Precursor dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.154e-10
Internal
sp_v3.0_unigene141393 SustainPine v3.0 287
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 33 kDa subunit 7.061e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain