Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome undetermined scaffold_139, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1055 SustainPine v3.0 2313
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 1.346e-12
Complete
sp_v3.0_unigene3254 SustainPine v3.0 2783
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 9.727e-13
Complete
sp_v3.0_unigene4230 SustainPine v3.0 1244
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 5.18e-31
Complete
sp_v3.0_unigene21213 SustainPine v3.0 1187
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 8.271e-34
Complete
sp_v3.0_unigene22954 SustainPine v3.0 1045
AutoFact: GRAM domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 7.335e-37
Putative Complete
sp_v3.0_unigene60264 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 4.136e-08
C-terminus
sp_v3.0_unigene61734 SustainPine v3.0 344
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 9.037e-13
Internal
sp_v3.0_unigene80664 SustainPine v3.0 239
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 2.159e-13
Internal
sp_v3.0_unigene128829 SustainPine v3.0 484
AutoFact: GRAM domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 7.347e-32
Internal
sp_v3.0_unigene162341 SustainPine v3.0 457
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 4.85e-39
Internal
sp_v3.0_unigene189172 SustainPine v3.0 897
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 6.215e-32
C-terminus
sp_v3.0_unigene203677 SustainPine v3.0 447
AutoFact: GRAM domain containing protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 2.585e-36
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain