Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA metabolic process

Term: GO:0016070  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79193 SustainPine v3.0 320
AutoFact: Eukaryotic translation initiation factor 4g, putative n=1 Tax=Ricinus communis RepID=B9SKF9_RICCO 6.0e-39
FL-Next: sp=Eukaryotic translation initiation factor 4G; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene84077 SustainPine v3.0 284
AutoFact: DUF3729 multi-domain protein 1.0e-08
coding
sp_v3.0_unigene94325 SustainPine v3.0 537
AutoFact: Major Facilitator Superfamily, putative [Oryza sativa Japonica Group] gb|ABA91455.1| Major Facilitator Superfamily protein, expressed [Oryza sativa Japonica Group] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Hippocampus abundant transcript 1 protein, putative 5.586e-10
Internal
sp_v3.0_unigene99815 SustainPine v3.0 439
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Hippocampus abundant transcript 1 protein, putative 4.916e-10
Internal
sp_v3.0_unigene100628 SustainPine v3.0 545
AutoFact: MIF4G domain and MA3 domain-containing protein [Arabidopsis thaliana] dbj|BAD44002.1| unknown protein [Arabidopsis thaliana] dbj|BAE98902.1| hypothetical protein [Arabidopsis thaliana] gb|AED92488.1| MIF4G domain and MA3 domain-containing protein [Arabido 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene106678 SustainPine v3.0 365
AutoFact: MIF4G domain and MA3 domain-containing protein [Arabidopsis thaliana] dbj|BAD44002.1| unknown protein [Arabidopsis thaliana] dbj|BAE98902.1| hypothetical protein [Arabidopsis thaliana] gb|AED92488.1| MIF4G domain and MA3 domain-containing protein [Arabido 3.0e-28
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene107236 SustainPine v3.0 235
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.242e-11
Internal
sp_v3.0_unigene109059 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene109551 SustainPine v3.0 401
AutoFact: pfam01535, PPR, PPR repeat 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.226e-21
Internal
sp_v3.0_unigene110817 SustainPine v3.0 435
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 8.032e-12
N-terminus
sp_v3.0_unigene113101 SustainPine v3.0 550
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.238e-09
Complete
sp_v3.0_unigene119791 SustainPine v3.0 223
AutoFact: HUA enhancer 2 [Arabidopsis thaliana] 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 2.108e-06
Internal
sp_v3.0_unigene120336 SustainPine v3.0 367
AutoFact: Pre-mRNA-splicing factor cwc22 n=3 Tax=Coccidioides RepID=E9DDT6_COCPS 0.0
FL-Next: tr=Os11g0151600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene120952 SustainPine v3.0 331
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.052e-08
N-terminus
sp_v3.0_unigene123803 SustainPine v3.0 241
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.379e-07
Internal
sp_v3.0_unigene124289 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 3.5e-14
Internal
sp_v3.0_unigene124774 SustainPine v3.0 167
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 3.858e-09
Internal
sp_v3.0_unigene126982 SustainPine v3.0 1455
AutoFact: MIF4G multi-domain protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene128093 SustainPine v3.0 476
AutoFact: Nop14 multi-domain protein 7.0e-15
coding
sp_v3.0_unigene130089 SustainPine v3.0 575
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Hippocampus abundant transcript 1 protein, putative 4.916e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain