Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: poly(U) RNA binding

Term: GO:0008266  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene985 SustainPine v3.0 1838
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S466_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 18 1.229e-08
Putative C-terminus
sp_v3.0_unigene1322 SustainPine v3.0 2343
AutoFact: Os06g0310200 protein n=5 Tax=Oryza sativa Japonica Group RepID=Q0DCM8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Splicing endonuclease positive effector sen1, putative 2.9e-09
C-terminus
sp_v3.0_unigene1475 SustainPine v3.0 2215
AutoFact: phosphatase like protein [Arabidopsis thaliana] emb|CAB78583.1| phosphatase like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 9.176e-22
Complete
sp_v3.0_unigene1598 SustainPine v3.0 3315
AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.168e-21
Complete
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene5293 SustainPine v3.0 2584
AutoFact: serine/threonine protein phosphatase 2A regulatory subunit B prime beta isoform [Arabidopsis thaliana] sp|O04376.1|2A5B_ARATH RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Short=AtB' beta; Short=PP2A, B' 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.322e-21
Complete
sp_v3.0_unigene7711 SustainPine v3.0 2572
AutoFact: phosphatase like protein [Arabidopsis thaliana] emb|CAB78583.1| phosphatase like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 9.176e-22
Complete
sp_v3.0_unigene12739 SustainPine v3.0 3184
AutoFact: serine/threonine protein phosphatase 2A regulatory subunit B prime beta isoform [Arabidopsis thaliana] sp|O04376.1|2A5B_ARATH RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Short=AtB' beta; Short=PP2A, B' 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.14e-21
Complete
sp_v3.0_unigene12747 SustainPine v3.0 1041
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene13356 SustainPine v3.0 777
AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RMK6_RICCO 2.0e-38
FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 5.409e-22
C-terminus
sp_v3.0_unigene19088 SustainPine v3.0 2790
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.168e-21
Complete
sp_v3.0_unigene23119 SustainPine v3.0 1629
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GHMP kinase 7.738e-09
Complete
sp_v3.0_unigene24891 SustainPine v3.0 423
AutoFact: Putative glycine-rich RNA-binding protein 2 n=1 Tax=Bambusa oldhamii RepID=B5KLZ7_BAMOL 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 7.67e-26
N-terminus
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene60048 SustainPine v3.0 385
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 4.0e-29
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene62080 SustainPine v3.0 279
AutoFact: NAD dependent epimerase/dehydratase, putative 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene63481 SustainPine v3.0 149
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Drosophila RepID=B4MEL9_DROVI 6.0e-17
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene64501 SustainPine v3.0 210
AutoFact: 50S ribosomal protein L4, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RK4_TOBAC 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R-protein L4 2.785e-13
Internal
sp_v3.0_unigene67257 SustainPine v3.0 349
AutoFact: chloroplast oxygen-evolving enhancer protein 1 [Leymus chinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE1 6.755e-40
C-terminus
sp_v3.0_unigene67569 SustainPine v3.0 378
AutoFact: Ferredoxin-NADP(H) oxidoreductase n=1 Tax=Triticum aestivum RepID=Q8RVZ8_WHEAT 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferredoxin--NADP reductase 3.66398e-41
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain