Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleoid

Term: GO:0009295  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene154778 SustainPine v3.0 435
AutoFact: Superoxide dismutase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ06_HIRBI 0.0
FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
Sma3: Superoxide dismutase 0.0
Internal
sp_v3.0_unigene155635 SustainPine v3.0 322
AutoFact: Mitochondrial DNA polymerase A n=1 Tax=Dictyostelium discoideum RepID=Q8I7W9_DICDI 2.0e-34
FL-Next: tr=DNA polymerase I; Nannochloropsis gaditana CCMP526. 0.0
Sma3: Putative PolI-like DNA polymerase 2.668e-08
Internal
sp_v3.0_unigene156455 SustainPine v3.0 360
AutoFact: Superoxide dismutase n=4 Tax=Nitrosococcus RepID=Q3J8G2_NITOC 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 1.56e-23
C-terminus
sp_v3.0_unigene157043 SustainPine v3.0 603
AutoFact: Superoxide dismutase n=1 Tax=Ectocarpus siliculosus RepID=D8LI17_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
Internal
sp_v3.0_unigene161857 SustainPine v3.0 155
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 1.0e-07
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Internal
sp_v3.0_unigene163323 SustainPine v3.0 245
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
Putative N-terminus
sp_v3.0_unigene165921 SustainPine v3.0 426
AutoFact: putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; 54319-51679 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene182964 SustainPine v3.0 810
AutoFact: Fructokinase-like protein 1 n=1 Tax=Solanum tuberosum RepID=D9IWP2_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative fructokinase 2.409e-08
C-terminus
sp_v3.0_unigene188819 SustainPine v3.0 476
AutoFact: Superoxide dismutase n=1 Tax=Ectocarpus siliculosus RepID=D8LI17_ECTSI 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene190047 SustainPine v3.0 364
AutoFact: Elongation factor Tu-2 n=1 Tax=Streptomyces ramocissimus RepID=EFTU2_STRRA 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene191568 SustainPine v3.0 417
AutoFact: Elongation factor Tu, chloroplastic n=4 Tax=Chattonellaceae RepID=B2XTC8_HETA2 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene208815 SustainPine v3.0 329
AutoFact: DNA gyrase subunit A, chloroplast/mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9SK06_RICCO 7.0e-28
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain