Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vernalization response

Term: GO:0010048  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene771 SustainPine v3.0 3196
• AutoFact: fn3 multi-domain protein 3.0e-08
• FL-Next: sp=Protein VERNALIZATION INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene1992 SustainPine v3.0 2754
• AutoFact: Embryonic flower 2 n=1 Tax=Yucca filamentosa RepID=Q1W6L0_YUCFI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Embryonic flower 2 2.227e-24
Complete
sp_v3.0_unigene4204 SustainPine v3.0 2098
• AutoFact: Embryonic flower 2 n=1 Tax=Yucca filamentosa RepID=Q1W6L0_YUCFI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Embryonic flower 2 1.009e-24
Complete
sp_v3.0_unigene4424 SustainPine v3.0 891
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 1.935e-17
Putative Complete
sp_v3.0_unigene4481 SustainPine v3.0 868
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 5.939e-30
Complete
sp_v3.0_unigene7889 SustainPine v3.0 2290
• AutoFact: Leo1 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene8344 SustainPine v3.0 3180
• AutoFact: DUF1423 multi-domain protein 3.0e-08
• FL-Next: sp=Protein VERNALIZATION INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene10189 SustainPine v3.0 542
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.312e-21
N-terminus
sp_v3.0_unigene12228 SustainPine v3.0 1314
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene16414 SustainPine v3.0 595
• AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene16654 SustainPine v3.0 1055
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene17959 SustainPine v3.0 1006
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene29755 SustainPine v3.0 718
• AutoFact: Terminal flower 2 protein n=5 Tax=Malus x domestica RepID=A7M6G1_MALDO 2.0e-18
• FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein LIKE HETEROCHROMATIN PROTEIN 1 5.58e-09
Putative N-terminus
sp_v3.0_unigene29814 SustainPine v3.0 529
• AutoFact: pfam00385, Chromo, Chromodomain 2.0e-10
• FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene30653 SustainPine v3.0 884
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene32645 SustainPine v3.0 877
• AutoFact: putative MADS box transcription factor PrMADS5 [Pinus radiata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.213e-21
Putative Complete
sp_v3.0_unigene44820 SustainPine v3.0 907
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene94499 SustainPine v3.0 1121
• AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 2.458e-17
Complete
sp_v3.0_unigene101259 SustainPine v3.0 677
• AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box protein 4.61e-19
N-terminus
sp_v3.0_unigene128576 SustainPine v3.0 815
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS8; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 8.892e-24
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain