Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of gene expression by genetic imprinting

Term: GO:0006349  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene103602 SustainPine v3.0 321
AutoFact: Retinoblastoma-related protein n=2 Tax=Hieracium RepID=RBR_HIEPL 2.0e-31
FL-Next: sp=Retinoblastoma-related protein; Medicago sativa (Alfalfa). 0.0
Sma3: Retinoblastoma-related protein 8.588e-16
Internal
sp_v3.0_unigene106675 SustainPine v3.0 223
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-20
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 9.835e-09
Internal
sp_v3.0_unigene108037 SustainPine v3.0 307
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 0.0
Sma3: SET domain protein 2.68e-11
Internal
sp_v3.0_unigene115554 SustainPine v3.0 228
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9SPD5_RICCO 3.0e-28
FL-Next: Isoform 2 of DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica GN=MET1A 0.0
Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene126569 SustainPine v3.0 1318
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene128476 SustainPine v3.0 432
AutoFact: embryonic flower 2 [Silene latifolia] 6.0e-12
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Sma3: Embryonic flower 2 3.463e-21
N-terminus
sp_v3.0_unigene128747 SustainPine v3.0 341
AutoFact: DNA (cytosine-5)-methyltransferase 1B n=9 Tax=Poaceae RepID=DNM1B_ORYSJ 3.0e-38
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene131962 SustainPine v3.0 128
AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 7.0e-08
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytosine-specific methyltransferase 8.105e-07
Internal
sp_v3.0_unigene132381 SustainPine v3.0 334
AutoFact: Retinoblastoma-related protein 1 n=2 Tax=Oryza sativa RepID=RBR1_ORYSJ 6.0e-37
FL-Next: sp=Retinoblastoma-related protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene138959 SustainPine v3.0 274
AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 3.0e-35
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene152377 SustainPine v3.0 525
AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene159645 SustainPine v3.0 218
AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 6.427e-09
Internal
sp_v3.0_unigene163333 SustainPine v3.0 241
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 6.675e-10
Internal
sp_v3.0_unigene163686 SustainPine v3.0 141
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 4.755e-09
Internal
sp_v3.0_unigene164782 SustainPine v3.0 205
AutoFact: [R] COG2940 Proteins containing SET domain 4.0e-09
FL-Next: sp=Histone-lysine N-methyltransferase CLF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Enhancer of zeste, ezh, putative 1.624e-08
Internal
sp_v3.0_unigene165741 SustainPine v3.0 223
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.937e-09
Internal
sp_v3.0_unigene197474 SustainPine v3.0 314
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9RWB0_RICCO 2.0e-27
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytosine-specific methyltransferase 1.325e-32
Internal
sp_v3.0_unigene208031 SustainPine v3.0 238
AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene208416 SustainPine v3.0 372
AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene208683 SustainPine v3.0 407
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 5.60519e-45
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.514e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain